Literature DB >> 24300833

Development of a loop-mediated isothermal amplification assay combined with a lateral flow dipstick for rapid and simple detection of classical swine fever virus in the field.

Vinay Kumar Chowdry1, Yuzi Luo2, Frederik Widén1, Hua-Ji Qiu2, Hu Shan3, Sándor Belák1, Lihong Liu4.   

Abstract

Classical swine fever (CSF) is a highly contagious viral disease and may cause heavy economic loss to farmers. The rapid, simple and accurate diagnosis of the disease at the frontline, for example on the farms of concern is crucial for disease control. This study describes the development and evaluation of a new loop-mediated isothermal amplification (LAMP) assay coupled with lateral flow dipstick (LFD) for the detection of classical swine fever virus (CSFV). This RT-LAMP-LFD assay combines the efficient one-step isothermal amplification of CSF viral RNA and the simplicity of the LFD to read the results within two to five minutes. Seven genotypes (1.1, 1.2, 1.3, 2.1, 2.2, 2.3 and 3.1), but not genotype 3.4, were successfully detected by the RT-LAMP-LFD assay, indicating that the method has a broad range of detection and can be applied in different geographical areas where CSFV strains belonging to these genotypes are present. The performance of this RT-LAMP-LFD assay was similar to that of the real-time RT-PCR. The analytical sensitivity was about 100copies per reaction when testing two genotypes (1.1 and 2.3). No cross-reactivity to non-CSFV pestiviruses was observed. This RT-LAMP-LFD assay can be a useful novel tool for the rapid, simple and economic diagnosis of classical swine fever in the field.
Copyright © 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Classical swine fever virus; Field diagnosis; Lateral flow dipstick; Molecular detection; RT-LAMP

Mesh:

Year:  2013        PMID: 24300833     DOI: 10.1016/j.jviromet.2013.11.013

Source DB:  PubMed          Journal:  J Virol Methods        ISSN: 0166-0934            Impact factor:   2.014


  9 in total

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2.  Development of phage immuno-loop-mediated isothermal amplification assays for organophosphorus pesticides in agro-products.

Authors:  Xiude Hua; Wei Yin; Haiyan Shi; Ming Li; Yanru Wang; Hong Wang; Yonghao Ye; Hee Joo Kim; Shirley J Gee; Minghua Wang; Fengquan Liu; Bruce D Hammock
Journal:  Anal Chem       Date:  2014-08-08       Impact factor: 6.986

3.  Rapid and sensitive detection of Senecavirus A by reverse transcription loop-mediated isothermal amplification combined with a lateral flow dipstick method.

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Journal:  PLoS One       Date:  2019-05-02       Impact factor: 3.240

4.  Insulated Isothermal Reverse Transcriptase PCR (iiRT-PCR) for Rapid and Sensitive Detection of Classical Swine Fever Virus.

Authors:  O Lung; J Pasick; M Fisher; C Buchanan; A Erickson; A Ambagala
Journal:  Transbound Emerg Dis       Date:  2015-01-27       Impact factor: 5.005

Review 5.  Loop-mediated isothermal amplification (LAMP): a versatile technique for detection of micro-organisms.

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Journal:  J Appl Microbiol       Date:  2018-02-12       Impact factor: 3.772

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Review 8.  Loop mediated isothermal amplification: An innovative gene amplification technique for animal diseases.

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Review 9.  Classical Swine Fever-An Updated Review.

Authors:  Sandra Blome; Christoph Staubach; Julia Henke; Jolene Carlson; Martin Beer
Journal:  Viruses       Date:  2017-04-21       Impact factor: 5.048

  9 in total

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