Literature DB >> 24299474

The use of archived tags in retrospective genetic analysis of fish.

Sara Bonanomi1, Nina Overgaard Therkildsen, Rasmus Berg Hedeholm, Jakob Hemmer-Hansen, Einar E Nielsen.   

Abstract

Collections of historical tissue samples from fish (e.g. scales and otoliths) stored in museums and fisheries institutions are precious sources of DNA for conducting retrospective genetic analysis. However, in some cases, only external tags used for documentation of spatial dynamics of fish populations have been preserved. Here, we test the usefulness of fish tags as a source of DNA for genetic analysis. We extract DNA from historical tags from cod collected in Greenlandic waters between 1950 and 1968. We show that the quantity and quality of DNA recovered from tags is comparable to DNA from archived otoliths from the same individuals. Surprisingly, levels of cross-contamination do not seem to be significantly higher in DNA from external (tag) than internal (otolith) sources. Our study therefore demonstrates that historical tags can be a highly valuable source of DNA for retrospective genetic analysis of fish.
© 2013 John Wiley & Sons Ltd.

Keywords:  Atlantic cod; DNA extraction; fish tags; historical samples; temporal genetic analysis

Mesh:

Substances:

Year:  2013        PMID: 24299474     DOI: 10.1111/1755-0998.12211

Source DB:  PubMed          Journal:  Mol Ecol Resour        ISSN: 1755-098X            Impact factor:   7.090


  1 in total

1.  A molecular phylogeny of historical and contemporary specimens of an under-studied micro-invertebrate group.

Authors:  Russell J S Orr; Maja M Sannum; Sanne Boessenkool; Emanuela Di Martino; Dennis P Gordon; Hannah L Mello; Matthias Obst; Mali H Ramsfjell; Abigail M Smith; Lee Hsiang Liow
Journal:  Ecol Evol       Date:  2020-12-09       Impact factor: 2.912

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.