Literature DB >> 24298421

Combining independent component analysis and Granger causality to investigate brain network dynamics with fNIRS measurements.

Zhen Yuan1.   

Abstract

In this study a new strategy that combines Granger causality mapping (GCM) and independent component analysis (ICA) is proposed to reveal complex neural network dynamics underlying cognitive processes using functional near infrared spectroscopy (fNIRS) measurements. The GCM-ICA algorithm implements the following two procedures: (i) extraction of the region of interests (ROIs) of cortical activations by ICA, and (ii) estimation of the direct causal influences in local brain networks using Granger causality among voxels of ROIs. Our results show that the use of GCM in conjunction with ICA is able to effectively identify the directional brain network dynamics in time-frequency domain based on fNIRS recordings.

Entities:  

Keywords:  (100.4996) Pattern recognition, neural networks; (170.0170) Medical optics and biotechnology; (300.0300) Spectroscopy

Year:  2013        PMID: 24298421      PMCID: PMC3829556          DOI: 10.1364/BOE.4.002629

Source DB:  PubMed          Journal:  Biomed Opt Express        ISSN: 2156-7085            Impact factor:   3.732


  16 in total

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4.  Extraction of cognitive activity-related waveforms from functional near-infrared spectroscopy signals.

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5.  Spatiotemporal and time-frequency analysis of functional near infrared spectroscopy brain signals using independent component analysis.

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Journal:  J Biomed Opt       Date:  2013-10       Impact factor: 3.170

6.  A MATLAB toolbox for Granger causal connectivity analysis.

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8.  Resting state functional connectivity of the whole head with near-infrared spectroscopy.

Authors:  Rickson C Mesquita; Maria A Franceschini; David A Boas
Journal:  Biomed Opt Express       Date:  2010-07-28       Impact factor: 3.732

9.  Independent component analysis of broadband near-infrared spectroscopy data acquired on adult human head.

Authors:  Irina Schelkanova; Vladislav Toronov
Journal:  Biomed Opt Express       Date:  2011-12-09       Impact factor: 3.732

10.  Fusion of fNIRS and fMRI data: identifying when and where hemodynamic signals are changing in human brains.

Authors:  Zhen Yuan; Jongchul Ye
Journal:  Front Hum Neurosci       Date:  2013-10-16       Impact factor: 3.169

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  14 in total

1.  In vivo three-dimensional characterization of the adult zebrafish brain using a 1325 nm spectral-domain optical coherence tomography system with the 27 frame/s video rate.

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Journal:  Biomed Opt Express       Date:  2015-09-11       Impact factor: 3.732

2.  A systematic investigation of reflectance diffuse optical tomography using nonlinear reconstruction methods and continuous wave measurements.

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Journal:  Biomed Opt Express       Date:  2014-08-12       Impact factor: 3.732

3.  Linking brain activation to topological organization in the frontal lobe as a synergistic indicator to characterize the difference between various cognitive processes of executive functions.

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Review 4.  Clinical applications of neurolinguistics in neurosurgery.

Authors:  Peng Wang; Zehao Zhao; Linghao Bu; Nijiati Kudulaiti; Qiao Shan; Yuyao Zhou; N U Farrukh Hameed; Yangming Zhu; Lei Jin; Jie Zhang; Junfeng Lu; Jinsong Wu
Journal:  Front Med       Date:  2021-05-12       Impact factor: 4.592

5.  Which is more costly in Chinese to English simultaneous interpreting, "pairing" or "transphrasing"? Evidence from an fNIRS neuroimaging study.

Authors:  Xiaohong Lin; Victoria Lai Cheng Lei; Defeng Li; Zhen Yuan
Journal:  Neurophotonics       Date:  2018-06-05       Impact factor: 3.593

6.  Distinction of directional coupling in sensorimotor networks between active and passive finger movements using fNIRS.

Authors:  Seung Hyun Lee; Sang Hyeon Jin; Jinung An
Journal:  Biomed Opt Express       Date:  2018-05-31       Impact factor: 3.732

7.  State-space models of impulse hemodynamic responses over motor, somatosensory, and visual cortices.

Authors:  Keum-Shik Hong; Hoang-Dung Nguyen
Journal:  Biomed Opt Express       Date:  2014-05-09       Impact factor: 3.732

8.  Dynamics of the human brain network revealed by time-frequency effective connectivity in fNIRS.

Authors:  Grégoire Vergotte; Kjerstin Torre; Venkata Chaitanya Chirumamilla; Abdul Rauf Anwar; Sergiu Groppa; Stéphane Perrey; Muthuraman Muthuraman
Journal:  Biomed Opt Express       Date:  2017-10-30       Impact factor: 3.732

9.  Optical mapping of brain activation during the English to Chinese and Chinese to English sight translation.

Authors:  Yan He; Meng-Yun Wang; Defeng Li; Zhen Yuan
Journal:  Biomed Opt Express       Date:  2017-11-07       Impact factor: 3.732

10.  Dynamic causal modelling for functional near-infrared spectroscopy.

Authors:  S Tak; A M Kempny; K J Friston; A P Leff; W D Penny
Journal:  Neuroimage       Date:  2015-02-25       Impact factor: 6.556

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