Literature DB >> 24293021

NMR study of short β(1-3)-glucans provides insights into the structure and interaction with Dectin-1.

Shinya Hanashima1, Akemi Ikeda, Hiroshi Tanaka, Yoshiyuki Adachi, Naohito Ohno, Takashi Takahashi, Yoshiki Yamaguchi.   

Abstract

β(1-3)-Glucans, abundant in fungi, have the potential to activate the innate immune response against various pathogens. Although part of the action is exerted through the C-type lectin-like receptor Dectin-1, details of the interaction mechanism with respect to glucan chain-length remain unclear. In this study, we investigated a set of short β(1-3)-glucans with varying degree of polymerization (DP); 3, 6, 7, 16, and laminarin (average DP; 25), analyzing the relationship between the structure and interaction with the C-type lectin-like domain (CTLD) of Dectin-1. The interaction of short β(1-3)-glucans (DP6, DP16, and laminarin) with the CTLD of Dectin-1 was systematically analyzed by (1)H-NMR titration as well as by saturation transfer difference (STD)-NMR. The domain interacted weakly with DP6, moderately with DP16 and strongly with laminarin, the latter plausibly forming oligomeric protein-laminarin complexes. To obtain structural insights of short β(1-3)-glucans, the exchange rates of hydroxy protons were analyzed by deuterium induced (13)C-NMR isotope shifts. The hydroxy proton at C4 of laminarin has slower exchange with the solvent than those of DP7 and DP16, suggesting that laminarin has a secondary structure. Diffusion ordered spectroscopy revealed that none of the short β(1-3)-glucans including laminarin forms a double or triple helix in water. Insights into the interaction of the short β(1-3)-glucans with Dectin-1 CTLD provide a basis to understand the molecular mechanisms of β-glucan recognition and cellular activation by Dectin-1.

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Year:  2013        PMID: 24293021     DOI: 10.1007/s10719-013-9510-x

Source DB:  PubMed          Journal:  Glycoconj J        ISSN: 0282-0080            Impact factor:   2.916


  32 in total

1.  Conformational analysis of beta-glycosidic linkages in 13C-labeled glucobiosides using inter-residue scalar coupling constants.

Authors:  Ulrika Olsson; Anthony S Serianni; Roland Stenutz
Journal:  J Phys Chem B       Date:  2008-03-18       Impact factor: 2.991

2.  Group epitope mapping by saturation transfer difference NMR to identify segments of a ligand in direct contact with a protein receptor.

Authors:  M Mayer; B Meyer
Journal:  J Am Chem Soc       Date:  2001-06-27       Impact factor: 15.419

3.  An initial event in the insect innate immune response: structural and biological studies of interactions between β-1,3-glucan and the N-terminal domain of β-1,3-glucan recognition protein.

Authors:  Huaien Dai; Yasuaki Hiromasa; Daisuke Takahashi; David VanderVelde; Jeffrey A Fabrick; Michael R Kanost; Ramaswamy Krishnamoorthi
Journal:  Biochemistry       Date:  2012-12-20       Impact factor: 3.162

4.  Carbon-13 NMR method for the detection of correlated hydrogen exchange at adjacent backbone peptide amides and its application to hydrogen exchange in five antiparallel beta strands within the hydrophobic core of Streptomyces subtilisin inhibitor (SSI).

Authors:  Kenichi Uchida; John L Markley; Masatsune Kainosho
Journal:  Biochemistry       Date:  2005-09-06       Impact factor: 3.162

5.  13C-NMR quantification of proton exchange at LewisX hydroxyl groups in water.

Authors:  Shinya Hanashima; Koichi Kato; Yoshiki Yamaguchi
Journal:  Chem Commun (Camb)       Date:  2011-09-05       Impact factor: 6.222

Review 6.  Beta-glucan recognition by the innate immune system.

Authors:  Helen S Goodridge; Andrea J Wolf; David M Underhill
Journal:  Immunol Rev       Date:  2009-07       Impact factor: 12.988

7.  1H, 13C and 15N chemical shift referencing in biomolecular NMR.

Authors:  D S Wishart; C G Bigam; J Yao; F Abildgaard; H J Dyson; E Oldfield; J L Markley; B D Sykes
Journal:  J Biomol NMR       Date:  1995-09       Impact factor: 2.835

8.  Differential high-affinity interaction of dectin-1 with natural or synthetic glucans is dependent upon primary structure and is influenced by polymer chain length and side-chain branching.

Authors:  Elizabeth L Adams; Peter J Rice; Bridget Graves; Harry E Ensley; Hai Yu; Gordon D Brown; Siamon Gordon; Mario A Monteiro; Erzsebet Papp-Szabo; Douglas W Lowman; Trevor D Power; Michael F Wempe; David L Williams
Journal:  J Pharmacol Exp Ther       Date:  2008-01-02       Impact factor: 4.030

9.  Ligands for the beta-glucan receptor, Dectin-1, assigned using "designer" microarrays of oligosaccharide probes (neoglycolipids) generated from glucan polysaccharides.

Authors:  Angelina S Palma; Ten Feizi; Yibing Zhang; Mark S Stoll; Alexander M Lawson; Esther Díaz-Rodríguez; María Asunción Campanero-Rhodes; Júlia Costa; Siamon Gordon; Gordon D Brown; Wengang Chai
Journal:  J Biol Chem       Date:  2005-12-21       Impact factor: 5.157

10.  Activation of the innate immune receptor Dectin-1 upon formation of a 'phagocytic synapse'.

Authors:  Helen S Goodridge; Christopher N Reyes; Courtney A Becker; Tamiko R Katsumoto; Jun Ma; Andrea J Wolf; Nandita Bose; Anissa S H Chan; Andrew S Magee; Michael E Danielson; Arthur Weiss; John P Vasilakos; David M Underhill
Journal:  Nature       Date:  2011-04-28       Impact factor: 49.962

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  16 in total

1.  Synthesis and Evaluation of Oligomeric Thioether-Linked Carbacyclic β-(1→3)-Glucan Mimetics.

Authors:  Peng Wen; Václav Větvička; David Crich
Journal:  J Org Chem       Date:  2019-04-15       Impact factor: 4.354

2.  Self-association of an insect β-1,3-glucan recognition protein upon binding laminarin stimulates prophenoloxidase activation as an innate immune response.

Authors:  Daisuke Takahashi; Huaien Dai; Yasuaki Hiromasa; Ramaswamy Krishnamoorthi; Michael R Kanost
Journal:  J Biol Chem       Date:  2014-08-21       Impact factor: 5.157

3.  Improvement of Euglena gracilis Paramylon Production through a Cocultivation Strategy with the Indole-3-Acetic Acid-Producing Bacterium Vibrio natriegens.

Authors:  Jee Young Kim; Jeong-Joo Oh; Min Seo Jeon; Gyu-Hyeok Kim; Yoon-E Choi
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

4.  Structural Analysis of Oligosaccharides and Glycoconjugates Using NMR.

Authors:  Yoshiki Yamaguchi; Takumi Yamaguchi; Koichi Kato
Journal:  Adv Neurobiol       Date:  2023

5.  Synthesis and Evaluation of 1,5-Dithia-d-laminaribiose, Triose, and Tetraose as Truncated β-(1→3)-Glucan Mimetics.

Authors:  Xiaoxiao Liao; Václav Větvička; David Crich
Journal:  J Org Chem       Date:  2018-12-04       Impact factor: 4.354

6.  En Route to the Transformation of Glycoscience: A Chemist's Perspective on Internal and External Crossroads in Glycochemistry.

Authors:  David Crich
Journal:  J Am Chem Soc       Date:  2020-12-22       Impact factor: 15.419

7.  Euglena gracilis paramylon activates human lymphocytes by upregulating pro-inflammatory factors.

Authors:  Rossella Russo; Laura Barsanti; Valter Evangelista; Anna M Frassanito; Vincenzo Longo; Laura Pucci; Giuseppe Penno; Paolo Gualtieri
Journal:  Food Sci Nutr       Date:  2016-05-20       Impact factor: 2.863

Review 8.  Three-dimensional structural aspects of protein-polysaccharide interactions.

Authors:  Masamichi Nagae; Yoshiki Yamaguchi
Journal:  Int J Mol Sci       Date:  2014-03-03       Impact factor: 5.923

Review 9.  "Rules of Engagement" of Protein-Glycoconjugate Interactions: A Molecular View Achievable by using NMR Spectroscopy and Molecular Modeling.

Authors:  Roberta Marchetti; Serge Perez; Ana Arda; Anne Imberty; Jesus Jimenez-Barbero; Alba Silipo; Antonio Molinaro
Journal:  ChemistryOpen       Date:  2016-06-07       Impact factor: 2.911

10.  Zymosan attenuates melanoma growth progression, increases splenocyte proliferation and induces TLR-2/4 and TNF-α expression in mice.

Authors:  Mehdi Taghavi; Esmaeil Mortaz; Alireza Khosravi; Ghasem Vahedi; Gert Folkerts; Mohammad Varahram; Mehdi Kazempour-Dizaji; Johan Garssen; Ian M Adcock
Journal:  J Inflamm (Lond)       Date:  2018-03-22       Impact factor: 4.981

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