Literature DB >> 24287972

Interaction of Sulfadiazine with Model Water Soluble Proteins: A Combined Fluorescence Spectroscopic and Molecular Modeling Approach.

Mullah Muhaiminul Islam1, N Shaemningwar Moyon1, Pynsakhiat Miki Gashnga1, Sivaprasad Mitra2.   

Abstract

The binding behavior of antibacterial drug sulfadiazine (SDZ) with water soluble globular proteins like bovine as well as human serum albumin (BSA and HSA, respectively) and lysozyme (LYS) was monitored by fluorescence titration and molecular docking calculations. The experimental data reveal that the quenching of the intrinsic protein fluorescence in presence of SDZ is due to the strong interaction in the drug binding site of the respective proteins. The Stern-Volmer plot shows positive deviation at higher quencher concentration for all the proteins and was explained in terms of a sphere of action model. The calculated fluorophore-quencher distances vary within 4 ~ 11 Å in different cases. Fluorescence experiments at different temperature indicate thermodynamically favorable binding of SDZ with the proteins with apparently strong association constant (~10(4)-10(5) M(-1)) and negative free energy of interaction within the range of -26.0 ~ -36.8 kJ mol(-1). The experimental findings are in good agreement with the respective parameters obtained from best energy ranked molecular docking calculation results of SDZ with all the three proteins.

Entities:  

Keywords:  Hydrophobic interaction; Lysozyme; Molecular docking; Serum albumin; Sulfadiazine; Tryptophan fluorescence quenching

Mesh:

Substances:

Year:  2013        PMID: 24287972     DOI: 10.1007/s10895-013-1330-7

Source DB:  PubMed          Journal:  J Fluoresc        ISSN: 1053-0509            Impact factor:   2.217


  35 in total

Review 1.  Measuring the forces that control protein interactions.

Authors:  D Leckband
Journal:  Annu Rev Biophys Biomol Struct       Date:  2000

2.  Conformational transitions of the three recombinant domains of human serum albumin depending on pH.

Authors:  M Dockal; D C Carter; F Rüker
Journal:  J Biol Chem       Date:  2000-02-04       Impact factor: 5.157

Review 3.  Practical aspects of the ligand-binding and enzymatic properties of human serum albumin.

Authors:  Ulrich Kragh-Hansen; Victor Tuan Giam Chuang; Masaki Otagiri
Journal:  Biol Pharm Bull       Date:  2002-06       Impact factor: 2.233

4.  Conformational changes of lysozyme refolding intermediates and implications for aggregation and renaturation.

Authors:  Zhenyu Gu; Xiaonan Zhu; Shaowei Ni; Zhiguo Su; Hai-Meng Zhou
Journal:  Int J Biochem Cell Biol       Date:  2004-05       Impact factor: 5.085

5.  1H NMR studies of human lysozyme: spectral assignment and comparison with hen lysozyme.

Authors:  C Redfield; C M Dobson
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

Review 6.  Time-resolved fluorescence of proteins.

Authors:  J M Beechem; L Brand
Journal:  Annu Rev Biochem       Date:  1985       Impact factor: 23.643

7.  Thermodynamics of protein association reactions: forces contributing to stability.

Authors:  P D Ross; S Subramanian
Journal:  Biochemistry       Date:  1981-05-26       Impact factor: 3.162

8.  Resolution and characterization of tryptophyl fluorescence of hen egg-white lysozyme by quenching- and time-resolved spectroscopy.

Authors:  E Nishimoto; S Yamashita; N Yamasaki; T Imoto
Journal:  Biosci Biotechnol Biochem       Date:  1999-02       Impact factor: 2.043

9.  Binding of lysozyme to phospholipid bilayers: evidence for protein aggregation upon membrane association.

Authors:  Galyna P Gorbenko; Valeriya M Ioffe; Paavo K J Kinnunen
Journal:  Biophys J       Date:  2007-04-13       Impact factor: 4.033

10.  Steady-state and time-resolved fluorescence studies on the ligand-induced conformational change in an active lysozyme derivative, Kyn62-lysozyme.

Authors:  S Yamashita; E Nishimoto; A G Szabo; N Yamasaki
Journal:  Biochemistry       Date:  1996-01-16       Impact factor: 3.162

View more
  3 in total

Review 1.  Sulfonamide drugs: structure, antibacterial property, toxicity, and biophysical interactions.

Authors:  Aben Ovung; Jhimli Bhattacharyya
Journal:  Biophys Rev       Date:  2021-03-29

2.  Combined computational and experimental studies on cysteine-sulfadiazine adduct formation.

Authors:  Nursel Acar SelÇukİ; Emine CoŞkun; Ender BİÇer
Journal:  Turk J Chem       Date:  2020-04-01       Impact factor: 1.239

3.  Heme Protein Binding of Sulfonamide Compounds: A Correlation Study by Spectroscopic, Calorimetric, and Computational Methods.

Authors:  Aben Ovung; A Mavani; Ambarnil Ghosh; Sabyasachi Chatterjee; Abhi Das; Gopinatha Suresh Kumar; Debes Ray; Vinod K Aswal; Jhimli Bhattacharyya
Journal:  ACS Omega       Date:  2022-02-04
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.