Literature DB >> 24279600

Strong nucleosomes of A. thaliana concentrate in centromere regions.

Bilal Salih1, Edward N Trifonov.   

Abstract

Earlier identified strongest nucleosome DNA sequences of A. thaliana, those with visible 10-11 base sequence periodicity, are mapped along chromosomes. Resulting positional distributions reveal distinct maxima, one per chromosome, located in the centromere regions. Sequence-directed nucleosome mapping demonstrates that the strong nucleosomes (SNs) make tight arrays, several 'parallel' nucleosomes each, suggesting a columnar chromatin structure. The SNs represent a new class of centromeric nucleosomes, presumably, participating in synapsis of chromatids and securing the centromere architecture.

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Keywords:  MuDR; centromere; chromosome structure; helitron; strong nucleosome; transposable element

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Year:  2013        PMID: 24279600     DOI: 10.1080/07391102.2013.860624

Source DB:  PubMed          Journal:  J Biomol Struct Dyn        ISSN: 0739-1102


  1 in total

1.  The Helitron family classification using SVM based on Fourier transform features applied on an unbalanced dataset.

Authors:  Rabeb Touati; Afef Elloumi Oueslati; Imen Messaoudi; Zied Lachiri
Journal:  Med Biol Eng Comput       Date:  2019-08-17       Impact factor: 2.602

  1 in total

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