Literature DB >> 24276555

Mass spectrometry imaging enriches biomarker discovery approaches with candidate mapping.

Alison J Scott1, Jace W Jones, Christie M Orschell, Thomas J MacVittie, Maureen A Kane, Robert K Ernst.   

Abstract

Integral to the characterization of radiation-induced tissue damage is the identification of unique biomarkers. Biomarker discovery is a challenging and complex endeavor requiring both sophisticated experimental design and accessible technology. The resources within the National Institute of Allergy and Infectious Diseases (NIAID)-sponsored Consortium, Medical Countermeasures Against Radiological Threats (MCART), allow for leveraging robust animal models with novel molecular imaging techniques. One such imaging technique, MALDI (matrix-assisted laser desorption ionization) mass spectrometry imaging (MSI), allows for the direct spatial visualization of lipids, proteins, small molecules, and drugs/drug metabolites-or biomarkers-in an unbiased manner. MALDI-MSI acquires mass spectra directly from an intact tissue slice in discrete locations across an x, y grid that are then rendered into a spatial distribution map composed of ion mass and intensity. The unique mass signals can be plotted to generate a spatial map of biomarkers that reflects pathology and molecular events. The crucial unanswered questions that can be addressed with MALDI-MSI include identification of biomarkers for radiation damage that reflect the response to radiation dose over time and the efficacy of therapeutic interventions. Techniques in MALDI-MSI also enable integration of biomarker identification among diverse animal models. Analysis of early, sublethally irradiated tissue injury samples from diverse mouse tissues (lung and ileum) shows membrane phospholipid signatures correlated with histological features of these unique tissues. This paper will discuss the application of MALDI-MSI for use in a larger biomarker discovery pipeline.

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Year:  2014        PMID: 24276555      PMCID: PMC4015108          DOI: 10.1097/HP.0b013e3182a4ec2f

Source DB:  PubMed          Journal:  Health Phys        ISSN: 0017-9078            Impact factor:   1.316


  27 in total

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  8 in total

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Authors:  Valentina Z Petukhova; Alexandria N Young; Jian Wang; Mingxun Wang; Andras Ladanyi; Rajul Kothari; Joanna E Burdette; Laura M Sanchez
Journal:  J Am Soc Mass Spectrom       Date:  2018-10-23       Impact factor: 3.109

3.  Host-based lipid inflammation drives pathogenesis in Francisella infection.

Authors:  Alison J Scott; Julia Maria Post; Raissa Lerner; Shane R Ellis; Joshua Lieberman; Kari Ann Shirey; Ron M A Heeren; Laura Bindila; Robert K Ernst
Journal:  Proc Natl Acad Sci U S A       Date:  2017-11-06       Impact factor: 11.205

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5.  Infection-derived lipids elicit an immune deficiency circuit in arthropods.

Authors:  Dana K Shaw; Xiaowei Wang; Lindsey J Brown; Adela S Oliva Chávez; Kathryn E Reif; Alexis A Smith; Alison J Scott; Erin E McClure; Vishant M Boradia; Holly L Hammond; Eric J Sundberg; Greg A Snyder; Lei Liu; Kathleen DePonte; Margarita Villar; Massaro W Ueti; José de la Fuente; Robert K Ernst; Utpal Pal; Erol Fikrig; Joao H F Pedra
Journal:  Nat Commun       Date:  2017-02-14       Impact factor: 14.919

6.  Streamlined Multimodal DESI and MALDI Mass Spectrometry Imaging on a Singular Dual-Source FT-ICR Mass Spectrometer.

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Journal:  Metabolites       Date:  2021-04-20

7.  Maintenance of Deep Lung Architecture and Automated Airway Segmentation for 3D Mass Spectrometry Imaging.

Authors:  Alison J Scott; Courtney E Chandler; Shane R Ellis; Ron M A Heeren; Robert K Ernst
Journal:  Sci Rep       Date:  2019-12-27       Impact factor: 4.379

8.  MALDI-MSI-A Step Forward in Overcoming the Diagnostic Challenges in Ovarian Tumors.

Authors:  Dagmara Pietkiewicz; Agnieszka Horała; Szymon Plewa; Piotr Jasiński; Ewa Nowak-Markwitz; Zenon J Kokot; Jan Matysiak
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  8 in total

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