Literature DB >> 24273615

Interpreting Whole-Genome Marker Data.

Bruce S Weir1.   

Abstract

The challenges of whole-genome data, when genotypes are available from hundreds of thousands of genetic markers, are explored for four topics in statistical genetics: Hardy-Weinberg testing, estimating linkage disequilibrium from unphased genotypic data, association mapping and characterizing population structure.

Entities:  

Keywords:  Association Mapping; Hardy-Weinberg; Linkage Disequilibrium; Population Structure; SNPs

Year:  2013        PMID： 24273615      PMCID： PMC3836609          DOI： 10.1007/s12561-013-9090-0

Source DB:  PubMed          Journal:  Stat Biosci        ISSN： 1867-1764


  8 in total

Review 1.  Estimating F-statistics.

Authors:  B S Weir; W G Hill
Journal:  Annu Rev Genet       Date:  2002-06-11       Impact factor: 16.830

2.  Complement factor H polymorphism in age-related macular degeneration.

Authors:  Robert J Klein; Caroline Zeiss; Emily Y Chew; Jen-Yue Tsai; Richard S Sackler; Chad Haynes; Alice K Henning; John Paul SanGiovanni; Shrikant M Mane; Susan T Mayne; Michael B Bracken; Frederick L Ferris; Jurg Ott; Colin Barnstable; Josephine Hoh
Journal:  Science       Date:  2005-03-10       Impact factor: 47.728

3.  A note on exact tests of Hardy-Weinberg equilibrium.

Authors:  Janis E Wigginton; David J Cutler; Goncalo R Abecasis
Journal:  Am J Hum Genet       Date:  2005-03-23       Impact factor: 11.025

4.  MENDELIAN PROPORTIONS IN A MIXED POPULATION.

Authors:  G H Hardy
Journal:  Science       Date:  1908-07-10       Impact factor: 47.728

5.  Distributions of Hardy-Weinberg equilibrium test statistics.

Authors:  R V Rohlfs; B S Weir
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

Review 6.  Linkage disequilibrium and association mapping.

Authors:  B S Weir
Journal:  Annu Rev Genomics Hum Genet       Date:  2008       Impact factor: 8.929

7.  ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.

Authors:  B S Weir; C Clark Cockerham
Journal:  Evolution       Date:  1984-11       Impact factor: 3.694

8.  Quality control and quality assurance in genotypic data for genome-wide association studies.

Authors:  Cathy C Laurie; Kimberly F Doheny; Daniel B Mirel; Elizabeth W Pugh; Laura J Bierut; Tushar Bhangale; Frederick Boehm; Neil E Caporaso; Marilyn C Cornelis; Howard J Edenberg; Stacy B Gabriel; Emily L Harris; Frank B Hu; Kevin B Jacobs; Peter Kraft; Maria Teresa Landi; Thomas Lumley; Teri A Manolio; Caitlin McHugh; Ian Painter; Justin Paschall; John P Rice; Kenneth M Rice; Xiuwen Zheng; Bruce S Weir
Journal:  Genet Epidemiol       Date:  2010-09       Impact factor: 2.135
  8 in total
  1 in total

1.  HW_TEST, a program for comprehensive HARDY-WEINBERG equilibrium testing.

Authors:  Fernando Azenha Bautzer Santos; Renan Barbosa Lemes; Paulo Alberto Otto
Journal:  Genet Mol Biol       Date:  2020-05-11       Impact factor: 1.771
  1 in total

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