Literature DB >> 24272627

Function of heterologous and pseudo border repeats in T region transfer via the octopine virulence system of Agrobacterium tumefaciens.

M J Van Haaren1, N J Sedee, M Krul, R A Schilperoort, P J Hooykaas.   

Abstract

The successful transfer of the Ti plasmid T region to the plant cell is mediated by its 24 bp border repeats. Processing of the T-region prior to transfer to the plant cell is started at the right border repeat and is stimulated by a transfer enhancer sequence called "overdrive". Left and right border repeats differ somewhat in nucleotide sequence; moreover, the repeats of different Ti and Ri plasmids are slightly different. Our data indicate that these differences do not have a significant influence on border activity. However, the overdrive sequence is essential for the efficient transfer of a T region via an octopine transfer system. Our data suggest that an overdrive sequence must also be present next to the right border repeats of the nopaline Ti plasmid and the agropine of octopine and nopaline Ti plasmids express some differences in T-DNA processing activities. of cotopine and nopaline Ti plasmids express some differences in T-DNA processing activities.Furthermore, we demonstrate that certain pseudo border repeats, sequences that resemble the native 24 bp border repeat and naturally occur within the octopine Ti plasmid T-region, are able to mediate T region transfer to the plant cell, albeit with much reduced efficiency as compared to wild-type border repeats.

Entities:  

Year:  1988        PMID: 24272627     DOI: 10.1007/BF00019517

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  22 in total

1.  T-DNA rearrangements due to tissue culture: somaclonal variation in crown gall tissues.

Authors:  R Peerbolte; P Ruigrok; G Wullems; R Schilperoort
Journal:  Plant Mol Biol       Date:  1987-01       Impact factor: 4.076

2.  Clones from a shooty tobacco crown gall tumor I: deletions, rearrangements and amplifications resulting in irregular T-DNA structures and organizations.

Authors:  R Peerbolte; K Leenhouts; G M Hooykaas-van Slogteren; J H Hoge; G J Wullems; R A Schilperoort
Journal:  Plant Mol Biol       Date:  1986-07       Impact factor: 4.076

3.  Functional analysis of the Agrobacterium tumefaciens octopine Ti-plasmid left and right T-region border fragments.

Authors:  M J van Haaren; J T Pronk; R A Schilperoort; P J Hooykaas
Journal:  Plant Mol Biol       Date:  1987-01       Impact factor: 4.076

4.  Nucleotide sequence analysis of TL-DNA of Agrobacterium rhizogenes agropine type plasmid. Identification of open reading frames.

Authors:  J L Slightom; M Durand-Tardif; L Jouanin; D Tepfer
Journal:  J Biol Chem       Date:  1986-01-05       Impact factor: 5.157

5.  Overdrive is a T-region transfer enhancer which stimulates T-strand production in Agrobacterium tumefaciens.

Authors:  M J van Haaren; N J Sedee; R A Schilperoort; P J Hooykaas
Journal:  Nucleic Acids Res       Date:  1987-11-11       Impact factor: 16.971

6.  The pIC plasmid and phage vectors with versatile cloning sites for recombinant selection by insertional inactivation.

Authors:  J L Marsh; M Erfle; E J Wykes
Journal:  Gene       Date:  1984-12       Impact factor: 3.688

7.  Octopine Ti-plasmid deletion mutants of agrobacterium tumefaciens with emphasis on the right side of the T-region.

Authors:  G Ooms; P J Hooykaas; R J Van Veen; P Van Beelen; T J Regensburg-Tuïnk; R A Schilperoort
Journal:  Plasmid       Date:  1982-01       Impact factor: 3.466

Review 8.  T-DNA of the Agrobacterium Ti and Ri plasmids.

Authors:  M W Bevan; M D Chilton
Journal:  Annu Rev Genet       Date:  1982       Impact factor: 16.830

9.  Interactions between octopine and nopaline plasmids in Agrobacterium tumefaciens.

Authors:  P J Hooykaas; H den Dulk-Ras; G Ooms; R A Schilperoort
Journal:  J Bacteriol       Date:  1980-09       Impact factor: 3.490

10.  Grown gall plant tumors of abnormal morphology, induced by Agrobacterium tumefaciens carrying mutated octopine Ti plasmids; analysis of T-DNA functions.

Authors:  G Ooms; P J Hooykaas; G Moolenaar; R A Schilperoort
Journal:  Gene       Date:  1981 Jun-Jul       Impact factor: 3.688

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  9 in total

1.  pGreen: a versatile and flexible binary Ti vector for Agrobacterium-mediated plant transformation.

Authors:  R P Hellens; E A Edwards; N R Leyland; S Bean; P M Mullineaux
Journal:  Plant Mol Biol       Date:  2000-04       Impact factor: 4.076

2.  Organization and functional analysis of three T-DNAs from the vitopine Ti plasmid pTiS4.

Authors:  J Canaday; J C Gérad; P Crouzet; L Otten
Journal:  Mol Gen Genet       Date:  1992-11

3.  Integration of Agrobacterium T-DNA into a tobacco chromosome: possible involvement of DNA homology between T-DNA and plant DNA.

Authors:  S Matsumoto; Y Ito; T Hosoi; Y Takahashi; Y Machida
Journal:  Mol Gen Genet       Date:  1990-12

4.  Plant development inhibitory genes in binary vector backbone improve quality event efficiency in soybean transformation.

Authors:  Xudong Ye; Edward J Williams; Junjiang Shen; James A Esser; Amy M Nichols; Michael W Petersen; Larry A Gilbertson
Journal:  Transgenic Res       Date:  2008-02-06       Impact factor: 2.788

5.  Frequent collinear long transfer of DNA inclusive of the whole binary vector during Agrobacterium-mediated transformation.

Authors:  A Wenck; M Czakó; I Kanevski; L Márton
Journal:  Plant Mol Biol       Date:  1997-08       Impact factor: 4.076

6.  Transfer of non-T-DNA portions of the Agrobacterium tumefaciens Ti plasmid pTiA6 from the left terminus of TL-DNA.

Authors:  V Ramanathan; K Veluthambi
Journal:  Plant Mol Biol       Date:  1995-09       Impact factor: 4.076

7.  Mutational analysis of the conserved domains of a T-region border repeat of Agrobacterium tumefaciens.

Authors:  M J van Haaren; N J Sedee; H A de Boer; R A Schilperoort; P J Hooykaas
Journal:  Plant Mol Biol       Date:  1989-11       Impact factor: 4.076

8.  T-DNA integration in Arabidopsis chromosomes. Presence and origin of filler DNA sequences.

Authors:  Pieter Windels; Sylvie De Buck; Erik Van Bockstaele; Marc De Loose; Ann Depicker
Journal:  Plant Physiol       Date:  2003-11-26       Impact factor: 8.340

9.  Transcription Activator-Like Effector Nucleases (TALEN)-Mediated Targeted DNA Insertion in Potato Plants.

Authors:  Adrienne Forsyth; Troy Weeks; Craig Richael; Hui Duan
Journal:  Front Plant Sci       Date:  2016-10-25       Impact factor: 5.753

  9 in total

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