Literature DB >> 24270571

Cohesin's role as an active chromatin domain anchorage revealed.

Christine Feig1, Duncan T Odom.   

Abstract

Cohesin is a conserved protein complex indispensible for proper cell division, because it secures sister-chromatid cohesion following DNA replication until segregation is required at the onset of anaphase. Recent studies have revealed functions beyond this, showing that cohesin binds to interphase chromatin regulating gene expression at select loci via long-range chromosomal interactions. In this issue of The EMBO Journal, Sofueva et al (2013) use a combination of chromatin conformation capture methods, classical FISH imaging, and loss-of-function studies to elegantly demonstrate how cohesin controls the 3D architectural organization of the genome.

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Year:  2013        PMID: 24270571      PMCID: PMC3981147          DOI: 10.1038/emboj.2013.248

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  10 in total

1.  A switch between topological domains underlies HoxD genes collinearity in mouse limbs.

Authors:  Guillaume Andrey; Thomas Montavon; Bénédicte Mascrez; Federico Gonzalez; Daan Noordermeer; Marion Leleu; Didier Trono; François Spitz; Denis Duboule
Journal:  Science       Date:  2013-06-07       Impact factor: 47.728

2.  Spatial partitioning of the regulatory landscape of the X-inactivation centre.

Authors:  Elphège P Nora; Bryan R Lajoie; Edda G Schulz; Luca Giorgetti; Ikuhiro Okamoto; Nicolas Servant; Tristan Piolot; Nynke L van Berkum; Johannes Meisig; John Sedat; Joost Gribnau; Emmanuel Barillot; Nils Blüthgen; Job Dekker; Edith Heard
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

3.  A CTCF-independent role for cohesin in tissue-specific transcription.

Authors:  Dominic Schmidt; Petra C Schwalie; Caryn S Ross-Innes; Antoni Hurtado; Gordon D Brown; Jason S Carroll; Paul Flicek; Duncan T Odom
Journal:  Genome Res       Date:  2010-03-10       Impact factor: 9.043

4.  Three-dimensional folding and functional organization principles of the Drosophila genome.

Authors:  Tom Sexton; Eitan Yaffe; Ephraim Kenigsberg; Frédéric Bantignies; Benjamin Leblanc; Michael Hoichman; Hugues Parrinello; Amos Tanay; Giacomo Cavalli
Journal:  Cell       Date:  2012-01-19       Impact factor: 41.582

5.  Mediator and cohesin connect gene expression and chromatin architecture.

Authors:  Michael H Kagey; Jamie J Newman; Steve Bilodeau; Ye Zhan; David A Orlando; Nynke L van Berkum; Christopher C Ebmeier; Jesse Goossens; Peter B Rahl; Stuart S Levine; Dylan J Taatjes; Job Dekker; Richard A Young
Journal:  Nature       Date:  2010-08-18       Impact factor: 49.962

6.  A role for cohesin in T-cell-receptor rearrangement and thymocyte differentiation.

Authors:  Vlad C Seitan; Bingtao Hao; Kikuë Tachibana-Konwalski; Thais Lavagnolli; Hegias Mira-Bontenbal; Karen E Brown; Grace Teng; Tom Carroll; Anna Terry; Katie Horan; Hendrik Marks; David J Adams; David G Schatz; Luis Aragon; Amanda G Fisher; Michael S Krangel; Kim Nasmyth; Matthias Merkenschlager
Journal:  Nature       Date:  2011-08-10       Impact factor: 49.962

7.  Topological domains in mammalian genomes identified by analysis of chromatin interactions.

Authors:  Jesse R Dixon; Siddarth Selvaraj; Feng Yue; Audrey Kim; Yan Li; Yin Shen; Ming Hu; Jun S Liu; Bing Ren
Journal:  Nature       Date:  2012-04-11       Impact factor: 49.962

8.  Cohesin-based chromatin interactions enable regulated gene expression within preexisting architectural compartments.

Authors:  Vlad C Seitan; Andre J Faure; Ye Zhan; Rachel Patton McCord; Bryan R Lajoie; Elizabeth Ing-Simmons; Boris Lenhard; Luca Giorgetti; Edith Heard; Amanda G Fisher; Paul Flicek; Job Dekker; Matthias Merkenschlager
Journal:  Genome Res       Date:  2013-09-03       Impact factor: 9.043

9.  Cohesin is required for higher-order chromatin conformation at the imprinted IGF2-H19 locus.

Authors:  Raffaella Nativio; Kerstin S Wendt; Yoko Ito; Joanna E Huddleston; Santiago Uribe-Lewis; Kathryn Woodfine; Christel Krueger; Wolf Reik; Jan-Michael Peters; Adele Murrell
Journal:  PLoS Genet       Date:  2009-11-26       Impact factor: 5.917

10.  Cohesin-mediated interactions organize chromosomal domain architecture.

Authors:  Sevil Sofueva; Eitan Yaffe; Wen-Ching Chan; Dimitra Georgopoulou; Matteo Vietri Rudan; Hegias Mira-Bontenbal; Steven M Pollard; Gary P Schroth; Amos Tanay; Suzana Hadjur
Journal:  EMBO J       Date:  2013-11-01       Impact factor: 11.598

  10 in total
  1 in total

1.  Chromosomes. A comprehensive Xist interactome reveals cohesin repulsion and an RNA-directed chromosome conformation.

Authors:  Anand Minajigi; John Froberg; Chunyao Wei; Hongjae Sunwoo; Barry Kesner; David Colognori; Derek Lessing; Bernhard Payer; Myriam Boukhali; Wilhelm Haas; Jeannie T Lee
Journal:  Science       Date:  2015-06-18       Impact factor: 47.728

  1 in total

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