Literature DB >> 24270504

Open and closed: the roles of linker histones in plants and animals.

Ryan S Over1, Scott D Michaels.   

Abstract

Histones package DNA in all eukaryotes and play key roles in regulating gene expression. Approximately 150 base pairs of DNA wraps around an octamer of core histones to form the nucleosome, the basic unit of chromatin. Linker histones compact chromatin further by binding to and neutralizing the charge of the DNA between nucleosomes. It is well established that chromatin packing is regulated by a complex pattern of posttranslational modifications (PTMs) to core histones, but linker histone function is less well understood. In this review, we describe the current understanding of the many roles that linker histones play in cellular processes, including gene regulation, cell division, and development, while putting the linker histone in the context of other nuclear proteins. Although intriguing roles for plant linker histones are beginning to emerge, much of our current understanding comes from work in animal systems. Many unanswered questions remain and additional work is required to fully elucidate the complex processes mediated by linker histones in plants.

Keywords:  DNA methylation; chromatin; development; differentiation; gene regulation; high mobility group proteins.; histone H1; imprinting; linker histone; posttranslational modifications

Mesh:

Substances:

Year:  2013        PMID: 24270504      PMCID: PMC3941478          DOI: 10.1093/mp/sst164

Source DB:  PubMed          Journal:  Mol Plant        ISSN: 1674-2052            Impact factor:   13.164


  105 in total

1.  Linker histones play a role in male meiosis and the development of pollen grains in tobacco.

Authors:  M Prymakowska-Bosak; M R Przewłoka; J Slusarczyk; M Kuraś; J Lichota; B Kiliańczyk; A Jerzmanowski
Journal:  Plant Cell       Date:  1999-12       Impact factor: 11.277

2.  Molecular genetic analysis of the drought-inducible linker histone variant in Arabidopsis thaliana.

Authors:  R Ascenzi; J S Gantt
Journal:  Plant Mol Biol       Date:  1999-09       Impact factor: 4.076

Review 3.  Linker histone subtypes and their allelic variants.

Authors:  Andrzej Kowalski; Jan Pałyga
Journal:  Cell Biol Int       Date:  2012-11-01       Impact factor: 3.612

4.  The nucleosome binding protein HMGN1 interacts with PCNA and facilitates its binding to chromatin.

Authors:  Yuri V Postnikov; Toshihiro Kurahashi; Ming Zhou; Michael Bustin
Journal:  Mol Cell Biol       Date:  2012-03-05       Impact factor: 4.272

Review 5.  Multifunctionality of the linker histones: an emerging role for protein-protein interactions.

Authors:  Steven J McBryant; Xu Lu; Jeffrey C Hansen
Journal:  Cell Res       Date:  2010-03-23       Impact factor: 25.617

6.  Maintenance of genomic methylation requires a SWI2/SNF2-like protein.

Authors:  J A Jeddeloh; T L Stokes; E J Richards
Journal:  Nat Genet       Date:  1999-05       Impact factor: 38.330

7.  M phase-specific phosphorylation of histone H1.5 at threonine 10 by GSK-3.

Authors:  Nicole Happel; Stefan Stoldt; Bernhard Schmidt; Detlef Doenecke
Journal:  J Mol Biol       Date:  2008-12-30       Impact factor: 5.469

8.  Structure and characterization of a putative drought-inducible H1 histone gene.

Authors:  T Wei; M A O'Connell
Journal:  Plant Mol Biol       Date:  1996-01       Impact factor: 4.076

9.  Linker histone H1.0 interacts with an extensive network of proteins found in the nucleolus.

Authors:  Anna A Kalashnikova; Duane D Winkler; Steven J McBryant; Ryan K Henderson; Jacob A Herman; Jennifer G DeLuca; Karolin Luger; Jessica E Prenni; Jeffrey C Hansen
Journal:  Nucleic Acids Res       Date:  2013-02-21       Impact factor: 16.971

10.  Histone h1 depletion impairs embryonic stem cell differentiation.

Authors:  Yunzhe Zhang; Marissa Cooke; Shiraj Panjwani; Kaixiang Cao; Beth Krauth; Po-Yi Ho; Magdalena Medrzycki; Dawit T Berhe; Chenyi Pan; Todd C McDevitt; Yuhong Fan
Journal:  PLoS Genet       Date:  2012-05-10       Impact factor: 5.917

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  11 in total

1.  The Linker Histone GH1-HMGA1 Is Involved in Telomere Stability and DNA Damage Repair.

Authors:  Cyril Charbonnel; Oleh Rymarenko; Olivier Da Ines; Fatiha Benyahya; Charles I White; Falk Butter; Simon Amiard
Journal:  Plant Physiol       Date:  2018-04-05       Impact factor: 8.340

Review 2.  DNA Damage Repair in the Context of Plant Chromatin.

Authors:  Mattia Donà; Ortrun Mittelsten Scheid
Journal:  Plant Physiol       Date:  2015-06-18       Impact factor: 8.340

3.  Correlation among DNA Linker Length, Linker Histone Concentration, and Histone Tails in Chromatin.

Authors:  Antoni Luque; Gungor Ozer; Tamar Schlick
Journal:  Biophys J       Date:  2016-06-07       Impact factor: 4.033

4.  Homocitrullination Is a Novel Histone H1 Epigenetic Mark Dependent on Aryl Hydrocarbon Receptor Recruitment of Carbamoyl Phosphate Synthase 1.

Authors:  Aditya D Joshi; Mehnaz G Mustafa; Cheryl F Lichti; Cornelis J Elferink
Journal:  J Biol Chem       Date:  2015-09-30       Impact factor: 5.157

5.  Phylogeny-Based Systematization of Arabidopsis Proteins with Histone H1 Globular Domain.

Authors:  Maciej Kotliński; Lukasz Knizewski; Anna Muszewska; Kinga Rutowicz; Maciej Lirski; Anja Schmidt; Célia Baroux; Krzysztof Ginalski; Andrzej Jerzmanowski
Journal:  Plant Physiol       Date:  2017-03-15       Impact factor: 8.340

Review 6.  Histone variants in environmental-stress-induced DNA damage repair.

Authors:  Danqi Chen; Chunyuan Jin
Journal:  Mutat Res Rev Mutat Res       Date:  2017-11-21       Impact factor: 5.657

7.  The Histone Deacetylase Complex 1 Protein of Arabidopsis Has the Capacity to Interact with Multiple Proteins Including Histone 3-Binding Proteins and Histone 1 Variants.

Authors:  Giorgio Perrella; Craig Carr; Maria A Asensi-Fabado; Naomi A Donald; Katalin Páldi; Matthew A Hannah; Anna Amtmann
Journal:  Plant Physiol       Date:  2016-03-07       Impact factor: 8.340

8.  Single Cell Quantification of Reporter Gene Expression in Live Adult Caenorhabditis elegans Reveals Reproducible Cell-Specific Expression Patterns and Underlying Biological Variation.

Authors:  Alexander R Mendenhall; Patricia M Tedesco; Bryan Sands; Thomas E Johnson; Roger Brent
Journal:  PLoS One       Date:  2015-05-06       Impact factor: 3.240

9.  Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters.

Authors:  Marion Cremer; Volker J Schmid; Felix Kraus; Yolanda Markaki; Ines Hellmann; Andreas Maiser; Heinrich Leonhardt; Sam John; John Stamatoyannopoulos; Thomas Cremer
Journal:  Epigenetics Chromatin       Date:  2017-08-07       Impact factor: 4.954

Review 10.  Crop epigenetics and the molecular hardware of genotype × environment interactions.

Authors:  Graham J King
Journal:  Front Plant Sci       Date:  2015-11-06       Impact factor: 5.753

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