Literature DB >> 24264463

Improved protein overexpression and purification strategies for structural studies of cyanobacterial metal-responsive transcription factor, SmtB from marine Synechococcus sp. PCC 7002.

Shelake Rahul Mahadev1, Hidenori Hayashi, Takahisa Ikegami, Shunnosuke Abe, Eugene Hayato Morita.   

Abstract

There are structural and functional differences in SmtB homologs, metal-responsive transcription factors responsible for sensing of excess heavy metal ions in marine and freshwater cyanobacterial strains. The structure of SmtB from freshwater Synechococcus sp. strain PCC 7942 is elucidated with nuclear magnetic resonance (NMR) and crystallography techniques. But knowledge about the functioning of SmtB homologs from marine species is limited till date. To enable NMR spectroscopic studies for investigating structural and functional aspects, modified protocols with higher yields of isotopically labeled SmtB, from marine species like Synechococcus sp. PCC 7002 are essential. In this study, smtB gene was cloned from genome of Synechococcus sp. PCC 7002 and overexpression protocol for recombinant SmtB was standardized in Escherichia coli containing T7 RNA polymerase/promoter system. Further, the protocol for large-scale production, isotope labeling with (15)N, and purification of recombinant SmtB in E. coli BL21(DE3)/pLysS cells was developed. Purified recombinant protein was successfully used for NMR spectroscopy experiments. These results indicate that the overexpression technique now developed is applicable to the structural and functional studies for the proteins being homologous to cyanobacterial SmtB from Synechococcus sp. PCC 7002.

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Year:  2013        PMID: 24264463     DOI: 10.1007/s10930-013-9525-y

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  32 in total

Review 1.  Bacterial metal-sensing proteins exemplified by ArsR-SmtB family repressors.

Authors:  Deenah Osman; Jennifer S Cavet
Journal:  Nat Prod Rep       Date:  2010-03-25       Impact factor: 13.423

2.  Expression of genes in cyanobacteria: adaptation of endogenous plasmids as platforms for high-level gene expression in Synechococcus sp. PCC 7002.

Authors:  Yu Xu; Richard M Alvey; Patrick O Byrne; Joel E Graham; Gaozhong Shen; Donald A Bryant
Journal:  Methods Mol Biol       Date:  2011

3.  Identifying interacting regions in the beta subunit of Escherichia coli RNA polymerase.

Authors:  P L Tavormina; W S Reznikoff; C A Gross
Journal:  J Mol Biol       Date:  1996-05-03       Impact factor: 5.469

4.  Cyanobacterial metallothionein gene expressed in Escherichia coli. Metal-binding properties of the expressed protein.

Authors:  J Shi; W P Lindsay; J W Huckle; A P Morby; N J Robinson
Journal:  FEBS Lett       Date:  1992-06-01       Impact factor: 4.124

5.  Allosteric negative regulation of smt O/P binding of the zinc sensor, SmtB, by metal ions: a coupled equilibrium analysis.

Authors:  Michael L VanZile; Xiaohua Chen; David P Giedroc
Journal:  Biochemistry       Date:  2002-08-06       Impact factor: 3.162

6.  Elucidation of primary (alpha(3)N) and vestigial (alpha(5)) heavy metal-binding sites in Staphylococcus aureus pI258 CadC: evolutionary implications for metal ion selectivity of ArsR/SmtB metal sensor proteins.

Authors:  Laura S Busenlehner; Tsu-Chien Weng; James E Penner-Hahn; David P Giedroc
Journal:  J Mol Biol       Date:  2002-06-07       Impact factor: 5.469

Review 7.  The SmtB/ArsR family of metalloregulatory transcriptional repressors: Structural insights into prokaryotic metal resistance.

Authors:  Laura S Busenlehner; Mario A Pennella; David P Giedroc
Journal:  FEMS Microbiol Rev       Date:  2003-06       Impact factor: 16.408

Review 8.  Zinc-handling in cyanobacteria: an update.

Authors:  Claudia A Blindauer
Journal:  Chem Biodivers       Date:  2008-10       Impact factor: 2.745

9.  Mining genomes of marine cyanobacteria for elements of zinc homeostasis.

Authors:  James P Barnett; Andrew Millard; Amira Z Ksibe; David J Scanlan; Ralf Schmid; Claudia Andrea Blindauer
Journal:  Front Microbiol       Date:  2012-04-11       Impact factor: 5.640

10.  Comparative study of the different mechanisms for zinc ion stress sensing in two cyanobacterial strains, Synechococcus sp. PCC 7942 and Synechocystis sp. PCC 6803.

Authors:  Eugene Hayato Morita; Satsuki Kawamoto; Shunnosuke Abe; Yoshitaka Nishiyama; Takahisa Ikegami; Hidenori Hayashi
Journal:  Biophysics (Nagoya-shi)       Date:  2012-07-06
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  1 in total

1.  A novel mechanism of "metal gel-shift" by histidine-rich Ni2+-binding Hpn protein from Helicobacter pylori strain SS1.

Authors:  Rahul Mahadev Shelake; Yuki Ito; Junya Masumoto; Eugene Hayato Morita; Hidenori Hayashi
Journal:  PLoS One       Date:  2017-02-16       Impact factor: 3.240

  1 in total

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