Literature DB >> 24262376

Randomized parcellation based inference.

Benoit Da Mota1, Virgile Fritsch2, Gaël Varoquaux2, Tobias Banaschewski3, Gareth J Barker4, Arun L W Bokde5, Uli Bromberg6, Patricia Conrod7, Jürgen Gallinat8, Hugh Garavan9, Jean-Luc Martinot10, Frauke Nees3, Tomas Paus11, Zdenka Pausova12, Marcella Rietschel3, Michael N Smolka13, Andreas Ströhle8, Vincent Frouin14, Jean-Baptiste Poline15, Bertrand Thirion16.   

Abstract

Neuroimaging group analyses are used to relate inter-subject signal differences observed in brain imaging with behavioral or genetic variables and to assess risks factors of brain diseases. The lack of stability and of sensitivity of current voxel-based analysis schemes may however lead to non-reproducible results. We introduce a new approach to overcome the limitations of standard methods, in which active voxels are detected according to a consensus on several random parcellations of the brain images, while a permutation test controls the false positive risk. Both on synthetic and real data, this approach shows higher sensitivity, better accuracy and higher reproducibility than state-of-the-art methods. In a neuroimaging-genetic application, we find that it succeeds in detecting a significant association between a genetic variant next to the COMT gene and the BOLD signal in the left thalamus for a functional Magnetic Resonance Imaging contrast associated with incorrect responses of the subjects from a Stop Signal Task protocol.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Group analysis; Multiple comparisons; Parcellation; Permutations; Reproducibility

Mesh:

Substances:

Year:  2013        PMID: 24262376     DOI: 10.1016/j.neuroimage.2013.11.012

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  5 in total

Review 1.  A comprehensive review of group level model performance in the presence of heteroscedasticity: Can a single model control Type I errors in the presence of outliers?

Authors:  Jeanette A Mumford
Journal:  Neuroimage       Date:  2016-12-25       Impact factor: 6.556

2.  Group-wise parcellation of the cortex through multi-scale spectral clustering.

Authors:  Sarah Parisot; Salim Arslan; Jonathan Passerat-Palmbach; William M Wells; Daniel Rueckert
Journal:  Neuroimage       Date:  2016-05-15       Impact factor: 6.556

Review 3.  Building connectomes using diffusion MRI: why, how and but.

Authors:  Stamatios N Sotiropoulos; Andrew Zalesky
Journal:  NMR Biomed       Date:  2017-06-27       Impact factor: 4.044

4.  Metabolic pathways associated with right ventricular adaptation to pulmonary hypertension: 3D analysis of cardiac magnetic resonance imaging.

Authors:  Mark I Attard; Timothy J W Dawes; Antonio de Marvao; Carlo Biffi; Wenzhe Shi; John Wharton; Christopher J Rhodes; Pavandeep Ghataorhe; J Simon R Gibbs; Luke S G E Howard; Daniel Rueckert; Martin R Wilkins; Declan P O'Regan
Journal:  Eur Heart J Cardiovasc Imaging       Date:  2019-06-01       Impact factor: 6.875

5.  Extracting orthogonal subject- and condition-specific signatures from fMRI data using whole-brain effective connectivity.

Authors:  Vicente Pallarés; Andrea Insabato; Ana Sanjuán; Simone Kühn; Dante Mantini; Gustavo Deco; Matthieu Gilson
Journal:  Neuroimage       Date:  2018-05-22       Impact factor: 6.556

  5 in total

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