Literature DB >> 24242674

Phylogeny of ten species of the genus Hordeum L. as revealed by AFLP markers and seed storage protein electrophoresis.

Haddad A El Rabey1, Abdulrahman L Al-Malki, Khalid O Abulnaja, Mohsen K Ebrahim, Taha Kumosani, Jalaluddin A Khan.   

Abstract

The phylogenetic relationships of 60 accessions representing ten species of the genus Hordeum were investigated based on AFLP markers and seed storage protein SDS-PAGE electrophoresis. A total of 339 AFLP polymorphic markers were scored as a result of fingerprinting the studied taxa using seven AFLP primer combinations, whereas 46 polymorphic protein bands resulted from the water soluble and water non-soluble seed storage protein electrophoresis. The phylogenetic tree deduced from AFLP analysis is concordant in a large extent with that deduced from seed storage protein electrophoresis. The studied taxa were clustered according to their genome type into two main groups representing the Old and New World's species. Inside each group the species were clustered according to their genome type. Highly significant cophenetic correlation coefficient was obtained between both AFLP (0.96) and seed storage protein (0.89) indicating the reliability of the results.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24242674     DOI: 10.1007/s11033-013-2870-2

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  14 in total

1.  Detection of Hordeum marinum genome in three polyploid Hordeum species and cytotypes by genomic in situ hybridization

Authors: 
Journal:  Hereditas       Date:  1999       Impact factor: 3.271

2.  Ribosomal DNA repeat unit polymorphism in 25 Hordeum species.

Authors:  S J Molnar; P K Gupta; G Fedak; R Wheatcroft
Journal:  Theor Appl Genet       Date:  1989-09       Impact factor: 5.699

3.  Phylogenetic analysis of the genus Hordeum using repetitive DNA sequences.

Authors:  S Svitashev; T Bryngelsson; A Vershinin; C Pedersen; T Säll; R von Bothmer
Journal:  Theor Appl Genet       Date:  1994-12       Impact factor: 5.699

4.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

5.  Development of AFLP markers in barley.

Authors:  X Qi; P Lindhout
Journal:  Mol Gen Genet       Date:  1997-04-16

Review 6.  Using nuclear gene data for plant phylogenetics: progress and prospects.

Authors:  Elizabeth A Zimmer; Jun Wen
Journal:  Mol Phylogenet Evol       Date:  2012-07-26       Impact factor: 4.286

7.  Use of locus-specific AFLP markers to construct a high-density molecular map in barley.

Authors:  X Qi; P Stam; P Lindhout
Journal:  Theor Appl Genet       Date:  1998-03       Impact factor: 5.699

8.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

9.  Combined mapping of AFLP and RFLP markers in barley.

Authors:  J Becker; P Vos; M Kuiper; F Salamini; M Heun
Journal:  Mol Gen Genet       Date:  1995-11-01

10.  Molecular phylogeography of domesticated barley traces expansion of agriculture in the Old World.

Authors:  Daisuke Saisho; Michael D Purugganan
Journal:  Genetics       Date:  2007-10-18       Impact factor: 4.562

View more
  1 in total

Review 1.  The Promise of Molecular and Genomic Techniques for Biodiversity Research and DNA Barcoding of the Arabian Peninsula Flora.

Authors:  Kareem A Mosa; Sanjay Gairola; Rahul Jamdade; Ali El-Keblawy; Khawla Ibrahim Al Shaer; Eman Khalid Al Harthi; Hatem A Shabana; Tamer Mahmoud
Journal:  Front Plant Sci       Date:  2019-01-21       Impact factor: 5.753

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.