Literature DB >> 24237345

Family-based exome-sequencing approach identifies rare susceptibility variants for lithium-responsive bipolar disorder.

Cristiana Cruceanu1, Amirthagowri Ambalavanan, Dan Spiegelman, Julie Gauthier, Ronald G Lafrenière, Patrick A Dion, Martin Alda, Gustavo Turecki, Guy A Rouleau.   

Abstract

Bipolar disorder (BD) is a psychiatric condition characterized by the occurrence of at least two episodes of clinically disturbed mood including mania and depression. A vast literature describing BD studies suggests that a strong genetic contribution likely underlies this condition; heritability is estimated to be as high as 80%. Many studies have identified BD susceptibility loci, but because of the genetic and phenotypic heterogeneity observed across individuals, very few loci were subsequently replicated. Research in BD genetics to date has consisted of classical linkage or genome-wide association studies, which have identified candidate genes hypothesized to present common susceptibility variants. Although the observation of such common variants is informative, they can only explain a small fraction of the predicted BD heritability, suggesting a considerable contribution would come from rare and highly penetrant variants. We are seeking to identify such rare variants, and to increase the likelihood of being successful, we aimed to reduce the phenotypic heterogeneity factor by focusing on a well-defined subphenotype of BD: excellent response to lithium monotherapy. Our group has previously shown positive response to lithium therapy clusters in families and has a consistent clinical presentation with minimal comorbidity. To identify such rare variants, we are using a targeted exome capture and high-throughput DNA sequencing approach, and analyzing the entire coding sequences of BD affected individuals from multigenerational families. We are prioritizing rare variants with a frequency of less than 1% in the population that segregate with affected status within each family, as well as being potentially highly penetrant (e.g., protein truncating, missense, or frameshift) or functionally relevant (e.g., 3'UTR, 5'UTR, or splicing). By focusing on rare variants in a familial cohort, we hope to explain a significant portion of the missing heritability in BD, as well as to narrow our current insight on the key biochemical pathways implicated in this complex disorder.

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Year:  2013        PMID: 24237345     DOI: 10.1139/gen-2013-0081

Source DB:  PubMed          Journal:  Genome        ISSN: 0831-2796            Impact factor:   2.166


  21 in total

Review 1.  Genetics of Bipolar Disorder: Recent Update and Future Directions.

Authors:  Fernando S Goes
Journal:  Psychiatr Clin North Am       Date:  2016-03

2.  Rare variants in neuronal excitability genes influence risk for bipolar disorder.

Authors:  Seth A Ament; Szabolcs Szelinger; Gustavo Glusman; Justin Ashworth; Liping Hou; Nirmala Akula; Tatyana Shekhtman; Judith A Badner; Mary E Brunkow; Denise E Mauldin; Anna-Barbara Stittrich; Katherine Rouleau; Sevilla D Detera-Wadleigh; John I Nurnberger; Howard J Edenberg; Elliot S Gershon; Nicholas Schork; Nathan D Price; Richard Gelinas; Leroy Hood; David Craig; Francis J McMahon; John R Kelsoe; Jared C Roach
Journal:  Proc Natl Acad Sci U S A       Date:  2015-02-17       Impact factor: 11.205

Review 3.  New developments in the genetics of bipolar disorder.

Authors:  Gen Shinozaki; James B Potash
Journal:  Curr Psychiatry Rep       Date:  2014-11       Impact factor: 5.285

4.  A statistical framework to guide sequencing choices in pedigrees.

Authors:  Charles Y K Cheung; Elizabeth Marchani Blue; Ellen M Wijsman
Journal:  Am J Hum Genet       Date:  2014-02-06       Impact factor: 11.025

Review 5.  [Genetics of bipolar disorder].

Authors:  M Budde; A J Forstner; K Adorjan; S K Schaupp; M M Nöthen; T G Schulze
Journal:  Nervenarzt       Date:  2017-07       Impact factor: 1.214

Review 6.  Molecular and genetic basis of depression.

Authors:  Madhumita Roy; Madhu G Tapadia; Shobhna Joshi; Biplob Koch
Journal:  J Genet       Date:  2014-12       Impact factor: 1.166

7.  Exome Sequencing of Familial Bipolar Disorder.

Authors:  Fernando S Goes; Mehdi Pirooznia; Jennifer S Parla; Melissa Kramer; Elena Ghiban; Senem Mavruk; Yun-Ching Chen; Eric T Monson; Virginia L Willour; Rachel Karchin; Matthew Flickinger; Adam E Locke; Shawn E Levy; Laura J Scott; Michael Boehnke; Eli Stahl; Jennifer L Moran; Christina M Hultman; Mikael Landén; Shaun M Purcell; Pamela Sklar; Peter P Zandi; W Richard McCombie; James B Potash
Journal:  JAMA Psychiatry       Date:  2016-06-01       Impact factor: 21.596

8.  Exome sequencing of a large family identifies potential candidate genes contributing risk to bipolar disorder.

Authors:  Tianxiao Zhang; Liping Hou; David T Chen; Francis J McMahon; Jen-Chyong Wang; John P Rice
Journal:  Gene       Date:  2017-12-14       Impact factor: 3.688

9.  Rare Risk Variants Identification by Identity-by-Descent Mapping and Whole-Exome Sequencing Implicates Neuronal Development Pathways in Schizophrenia and Bipolar Disorder.

Authors:  C Salvoro; S Bortoluzzi; A Coppe; G Valle; E Feltrin; M L Mostacciuolo; G Vazza
Journal:  Mol Neurobiol       Date:  2018-02-06       Impact factor: 5.590

Review 10.  On the Teneurin track: a new synaptic organization molecule emerges.

Authors:  Timothy J Mosca
Journal:  Front Cell Neurosci       Date:  2015-05-27       Impact factor: 5.505

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