Literature DB >> 24227008

Laser capture microdissection for the investigative pathologist.

H Liu1, T L McDowell, N E Hanson, X Tang, J Fujimoto, J Rodriguez-Canales.   

Abstract

An important step in translational research is the validation of molecular findings from in vitro experiments using tissue specimens. However, tissue specimens are complex and contain a multitude of diverse cell populations that interfere with the molecular profiling data of a specific cell type. Laser capture microdissection (LCM) alleviates this issue by providing a valuable tool for the enrichment of a specific cell type within complex tissue samples. However, LCM and molecular analysis from tissue specimens can be complex and challenging due to numerous issues related with the tissue processing and its impact on the integrity of biomolecules in the specimen. The intricate nature of this application highlights the essential role a pathologist plays in translational research by contributing an expertise in histopathology, tissue handling, tissue analysis techniques, and clinical correlation of biological findings. The present review examines key practical aspects in tissue handling, specimen selection, quality control, and sample preparation for LCM and downstream molecular analyses that are a primary objective of the investigative pathologist.

Keywords:  laser capture microdissection; molecular pathology; tissue processing

Mesh:

Substances:

Year:  2013        PMID: 24227008     DOI: 10.1177/0300985813510533

Source DB:  PubMed          Journal:  Vet Pathol        ISSN: 0300-9858            Impact factor:   2.221


  3 in total

1.  Optimization of RNA extraction from laser captured microdissected glomeruli from formalin-fixed paraffin-embedded mouse kidney samples for Nanostring analysis.

Authors:  Abigail Hay; Jean-Martin Lapointe; Arthur Lewis; Carol Moreno Quinn; Elena Miranda
Journal:  Histol Histopathol       Date:  2019-06-11       Impact factor: 2.303

2.  An optimised protocol for isolation of RNA from small sections of laser-capture microdissected FFPE tissue amenable for next-generation sequencing.

Authors:  Parisa Amini; Julia Ettlin; Lennart Opitz; Elena Clementi; Alexandra Malbon; Enni Markkanen
Journal:  BMC Mol Biol       Date:  2017-08-23       Impact factor: 2.946

3.  Formalin-Fixed Paraffin-Embedded (FFPE) samples are not a beneficial replacement for frozen tissues in fetal membrane microbiota research.

Authors:  Rochelle Hockney; Caroline H Orr; Gareth J Waring; Inge Christiaens; Gillian Taylor; Stephen P Cummings; Stephen C Robson; Andrew Nelson
Journal:  PLoS One       Date:  2022-03-17       Impact factor: 3.240

  3 in total

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