Literature DB >> 24217021

Label-free quantitative protein profiling of vastus lateralis muscle during human aging.

Laëtitia Théron1, Marine Gueugneau, Cécile Coudy, Didier Viala, Astrid Bijlsma, Gillian Butler-Browne, Andrea Maier, Daniel Béchet, Christophe Chambon.   

Abstract

Sarcopenia corresponds to the loss of muscle mass occurring during aging, and is associated with a loss of muscle functionality. Proteomic links the muscle functional changes with protein expression pattern. To better understand the mechanisms involved in muscle aging, we performed a proteomic analysis of Vastus lateralis muscle in mature and older women. For this, a shotgun proteomic method was applied to identify soluble proteins in muscle, using a combination of high performance liquid chromatography and mass spectrometry. A label-free protein profiling was then conducted to quantify proteins and compare profiles from mature and older women. This analysis showed that 35 of the 366 identified proteins were linked to aging in muscle. Most of the proteins were under-represented in older compared with mature women. We built a functional interaction network linking the proteins differentially expressed between mature and older women. The results revealed that the main differences between mature and older women were defined by proteins involved in energy metabolism and proteins from the myofilament and cytoskeleton. This is the first time that label-free quantitative proteomics has been applied to study of aging mechanisms in human skeletal muscle. This approach highlights new elements for elucidating the alterations observed during aging and may lead to novel sarcopenia biomarkers.

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Year:  2013        PMID: 24217021      PMCID: PMC3879620          DOI: 10.1074/mcp.M113.032698

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  58 in total

Review 1.  Aging of the human neuromuscular system.

Authors:  Anthony A Vandervoort
Journal:  Muscle Nerve       Date:  2002-01       Impact factor: 3.217

2.  Proteomic study of calpain interacting proteins during skeletal muscle aging.

Authors:  C Brulé; E Dargelos; R Diallo; A Listrat; D Béchet; P Cottin; S Poussard
Journal:  Biochimie       Date:  2010-09-17       Impact factor: 4.079

3.  Assessment of hierarchical clustering methodologies for proteomic data mining.

Authors:  Bruno Meunier; Emilie Dumas; Isabelle Piec; Daniel Béchet; Michel Hébraud; Jean-François Hocquette
Journal:  J Proteome Res       Date:  2007-01       Impact factor: 4.466

4.  Properties of easily releasable myofilaments: are they the first step in myofibrillar protein turnover?

Authors:  Girija Neti; Stefanie M Novak; Valery F Thompson; Darrel E Goll
Journal:  Am J Physiol Cell Physiol       Date:  2009-03-25       Impact factor: 4.249

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  Decline in skeletal muscle mitochondrial function with aging in humans.

Authors:  Kevin R Short; Maureen L Bigelow; Jane Kahl; Ravinder Singh; Jill Coenen-Schimke; Sreekumar Raghavakaimal; K Sreekumaran Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-30       Impact factor: 11.205

Review 7.  Eukaryotic elongation factor-2 (eEF2): its regulation and peptide chain elongation.

Authors:  Gautam Kaul; Gurulingappa Pattan; Towseef Rafeequi
Journal:  Cell Biochem Funct       Date:  2011-03-10       Impact factor: 3.685

8.  Substrate specificity of human carnitine acetyltransferase: Implications for fatty acid and branched-chain amino acid metabolism.

Authors:  Sara Violante; Lodewijk Ijlst; Jos Ruiter; Janet Koster; Henk van Lenthe; Marinus Duran; Isabel Tavares de Almeida; Ronald J A Wanders; Sander M Houten; Fátima V Ventura
Journal:  Biochim Biophys Acta       Date:  2013-02-24

9.  Comparative proteomic profile of rat sciatic nerve and gastrocnemius muscle tissues in ageing by 2-D DIGE.

Authors:  Daniele Capitanio; Michele Vasso; Chiara Fania; Manuela Moriggi; Agnese Viganò; Patrizia Procacci; Valerio Magnaghi; Cecilia Gelfi
Journal:  Proteomics       Date:  2009-04       Impact factor: 3.984

Review 10.  Mass spectrometry-based label-free quantitative proteomics.

Authors:  Wenhong Zhu; Jeffrey W Smith; Chun-Ming Huang
Journal:  J Biomed Biotechnol       Date:  2009-11-10
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  23 in total

1.  Unraveling molecular effects of ADAR1 overexpression in HEK293T cells by label-free quantitative proteomics.

Authors:  Jisheng Guo; Xiaoyue Wang; Xin Lü; Ruirui Jing; Junqiang Li; CuiLing Li; Daoguang Wang; Baibin Bi; Xinjun Chen; Fengqin Wang; Shengnan Sun; Jing Gong; Kazem M Azadzoi; Jing-Hua Yang
Journal:  Cell Cycle       Date:  2016-04-22       Impact factor: 4.534

2.  Label-free quantitative proteomic analysis reveals potential biomarkers and pathways in renal cell carcinoma.

Authors:  Zuohui Zhao; Fei Wu; Sentai Ding; Liang Sun; Zhao Liu; Kejia Ding; Jiaju Lu
Journal:  Tumour Biol       Date:  2014-10-15

3.  Proteomic profiling of the retinas in a neonatal rat model of oxygen-induced retinopathy with a reproducible ion-current-based MS1 approach.

Authors:  Chengjian Tu; Kay D Beharry; Xiaomeng Shen; Jun Li; Lianshui Wang; Jacob V Aranda; Jun Qu
Journal:  J Proteome Res       Date:  2015-04-06       Impact factor: 4.466

4.  Proteomic features of skeletal muscle adaptation to resistance exercise training as a function of age.

Authors:  Colleen S Deane; Bethan E Phillips; Craig R G Willis; Daniel J Wilkinson; Ken Smith; Nahoko Higashitani; John P Williams; Nathaniel J Szewczyk; Philip J Atherton; Atsushi Higashitani; Timothy Etheridge
Journal:  Geroscience       Date:  2022-09-26       Impact factor: 7.581

5.  Proteomics of muscle chronological ageing in post-menopausal women.

Authors:  Marine Gueugneau; Cécile Coudy-Gandilhon; Ophélie Gourbeyre; Christophe Chambon; Lydie Combaret; Cécile Polge; Daniel Taillandier; Didier Attaix; Bertrand Friguet; Andrea B Maier; Gillian Butler-Browne; Daniel Béchet
Journal:  BMC Genomics       Date:  2014-12-23       Impact factor: 3.969

Review 6.  Comparative Skeletal Muscle Proteomics Using Two-Dimensional Gel Electrophoresis.

Authors:  Sandra Murphy; Paul Dowling; Kay Ohlendieck
Journal:  Proteomes       Date:  2016-09-09

7.  A Proof of Concept to Bridge the Gap between Mass Spectrometry Imaging, Protein Identification and Relative Quantitation: MSI~LC-MS/MS-LF.

Authors:  Laëtitia Théron; Delphine Centeno; Cécile Coudy-Gandilhon; Estelle Pujos-Guillot; Thierry Astruc; Didier Rémond; Jean-Claude Barthelemy; Frédéric Roche; Léonard Feasson; Michel Hébraud; Daniel Béchet; Christophe Chambon
Journal:  Proteomes       Date:  2016-10-26

8.  New pathobiochemical insights into dystrophinopathy from the proteomics of senescent mdx mouse muscle.

Authors:  Ashling Holland; Paul Dowling; Kay Ohlendieck
Journal:  Front Aging Neurosci       Date:  2014-06-03       Impact factor: 5.750

9.  Unraveling Molecular Differences of Gastric Cancer by Label-Free Quantitative Proteomics Analysis.

Authors:  Peng Dai; Qin Wang; Weihua Wang; Ruirui Jing; Wei Wang; Fengqin Wang; Kazem M Azadzoi; Jing-Hua Yang; Zhen Yan
Journal:  Int J Mol Sci       Date:  2016-01-21       Impact factor: 5.923

10.  Molecular Signatures of Membrane Protein Complexes Underlying Muscular Dystrophy.

Authors:  Rolf Turk; Jordy J Hsiao; Melinda M Smits; Brandon H Ng; Tyler C Pospisil; Kayla S Jones; Kevin P Campbell; Michael E Wright
Journal:  Mol Cell Proteomics       Date:  2016-04-20       Impact factor: 5.911

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