Literature DB >> 24213103

Viability of soil bacteria: Optimization of plate-counting technique and comparison between total counts and plate counts within different size groups.

R A Olsen1, L R Bakken.   

Abstract

Viable counts of heterotropic soil bacteria were 3-5 times higher on low-nutrient agar media compared with a series of conventional agar media. Substantial amounts of monosaccharides and amino acids were present in solid media made from distilled water and agar powder, and a salt-solution agar medium (without organic substrates added) gave practically the same colony counts as the low nutrient soil extract agar medium. MPN values were comparable to or lower than plate counts. A search for slow-growing cells in the negative MPN tubes by fluorescence microscopical examination after 3 months incubation was negative.The viable counts were 2-4% of the total microscopical counts in different soils. Assuming that the colony-forming cells did not derive from the numerous "dwarf" cells present in soil, a calculated percent viability of the larger cells was about 10%. The ecological significance of the plate-counting technique is discussed.

Entities:  

Year:  1987        PMID: 24213103     DOI: 10.1007/BF02014963

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  16 in total

1.  Initial phases of starvation and activity of bacteria at surfaces.

Authors:  S Kjelleberg; B A Humphrey; K C Marshall
Journal:  Appl Environ Microbiol       Date:  1983-11       Impact factor: 4.792

2.  Starvation-survival patterns of sixteen freshly isolated open-ocean bacteria.

Authors:  P S Amy; R Y Morita
Journal:  Appl Environ Microbiol       Date:  1983-03       Impact factor: 4.792

3.  A comparison of a direct- and a plate counting technique for the quantitative estimation of soil micro-organisms.

Authors:  F A SKINNER; P C JONES; J E MOLLISON
Journal:  J Gen Microbiol       Date:  1952-05

4.  Survival and viability of nonculturableEscherichia coli andVibrio cholerae in the estuarine and marine environment.

Authors:  H S Xu; N Roberts; F L Singleton; R W Attwell; D J Grimes; R R Colwell
Journal:  Microb Ecol       Date:  1982-12       Impact factor: 4.552

5.  Effects of water fluctuations on microbial mass and activity in soil.

Authors:  V Lund; J Goksøyr
Journal:  Microb Ecol       Date:  1980-06       Impact factor: 4.552

6.  Filterable marine bacteria found in the deep sea: Distribution, taxonomy, and response to starvation.

Authors:  P S Tabor; K Ohwada; R R Colwell
Journal:  Microb Ecol       Date:  1981-03       Impact factor: 4.552

7.  External microflora of a marine wood-boring isopod.

Authors:  P J Boyle; R Mitchell
Journal:  Appl Environ Microbiol       Date:  1981-10       Impact factor: 4.792

8.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

9.  [Quantitative determination of soil microflora with the Koch method. I. Effect of various dispersants and diluents on soil dispersions and total bacterial count].

Authors:  S B Singh-Verma
Journal:  Zentralbl Bakteriol Parasitenkd Infektionskr Hyg       Date:  1968-07

10.  Small cells in pure cultures of Agromyces ramosus and in natural soil.

Authors:  L E Casida
Journal:  Can J Microbiol       Date:  1977-02       Impact factor: 2.419

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  49 in total

1.  Quantification of bias related to the extraction of DNA directly from soils.

Authors:  A Frostegård; S Courtois; V Ramisse; S Clerc; D Bernillon; F Le Gall; P Jeannin; X Nesme; P Simonet
Journal:  Appl Environ Microbiol       Date:  1999-12       Impact factor: 4.792

2.  Characterization and identification of numerically abundant culturable bacteria from the anoxic bulk soil of rice paddy microcosms.

Authors:  K J Chin; D Hahn; U Hengstmann; W Liesack; P H Janssen
Journal:  Appl Environ Microbiol       Date:  1999-11       Impact factor: 4.792

3.  Laboratory cultivation of widespread and previously uncultured soil bacteria.

Authors:  Shayne J Joseph; Philip Hugenholtz; Parveen Sangwan; Catherine A Osborne; Peter H Janssen
Journal:  Appl Environ Microbiol       Date:  2003-12       Impact factor: 4.792

4.  Effects of growth medium, inoculum size, and incubation time on culturability and isolation of soil bacteria.

Authors:  Kathryn E R Davis; Shayne J Joseph; Peter H Janssen
Journal:  Appl Environ Microbiol       Date:  2005-02       Impact factor: 4.792

5.  Prevalence of sucretolerant bacteria in common soils and their isolation and characterization.

Authors:  Casper Fredsgaard; Donald B Moore; Fei Chen; Benton C Clark; Mark A Schneegurt
Journal:  Antonie Van Leeuwenhoek       Date:  2017-04-13       Impact factor: 2.271

6.  Cell size distributions of soil bacterial and archaeal taxa.

Authors:  Maria C Portillo; Jonathan W Leff; Christian L Lauber; Noah Fierer
Journal:  Appl Environ Microbiol       Date:  2013-09-27       Impact factor: 4.792

7.  The relationship between cell size and viability of soil bacteria.

Authors:  L R Bakken; R A Olsen
Journal:  Microb Ecol       Date:  1987-03       Impact factor: 4.552

8.  Factors responsible for the differences in cultural estimates and direct microscopical counts of populations of bacterivorous nanoflagellates.

Authors:  D A Caron; P G Davis; J M Sieburth
Journal:  Microb Ecol       Date:  1989-09       Impact factor: 4.552

9.  Flow cytometric measurements of cell volumes and DNA contents during culture of indigenous soil bacteria.

Authors:  H Christensen; R A Olsen; L R Bakken
Journal:  Microb Ecol       Date:  1995-01       Impact factor: 4.552

10.  Effect of microbial species richness on community stability and community function in a model plant-based wastewater processing system.

Authors:  K L Cook; J L Garland; A C Layton; H M Dionisi; L H Levine; G S Sayler
Journal:  Microb Ecol       Date:  2006-10-31       Impact factor: 4.552

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