Literature DB >> 24206386

Functional identification of spike-processing neural circuits.

Aurel A Lazar1, Yevgeniy B Slutskiy.   

Abstract

We introduce a novel approach for a complete functional identification of biophysical spike-processing neural circuits. The circuits considered accept multidimensional spike trains as their input and comprise a multitude of temporal receptive fields and conductance-based models of action potential generation. Each temporal receptive field describes the spatiotemporal contribution of all synapses between any two neurons and incorporates the (passive) processing carried out by the dendritic tree. The aggregate dendritic current produced by a multitude of temporal receptive fields is encoded into a sequence of action potentials by a spike generator modeled as a nonlinear dynamical system. Our approach builds on the observation that during any experiment, an entire neural circuit, including its receptive fields and biophysical spike generators, is projected onto the space of stimuli used to identify the circuit. Employing the reproducing kernel Hilbert space (RKHS) of trigonometric polynomials to describe input stimuli, we quantitatively describe the relationship between underlying circuit parameters and their projections. We also derive experimental conditions under which these projections converge to the true parameters. In doing so, we achieve the mathematical tractability needed to characterize the biophysical spike generator and identify the multitude of receptive fields. The algorithms obviate the need to repeat experiments in order to compute the neurons' rate of response, rendering our methodology of interest to both experimental and theoretical neuroscientists.

Mesh:

Year:  2013        PMID: 24206386     DOI: 10.1162/NECO_a_00543

Source DB:  PubMed          Journal:  Neural Comput        ISSN: 0899-7667            Impact factor:   2.026


  6 in total

1.  Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain.

Authors:  Lev E Givon; Aurel A Lazar
Journal:  PLoS One       Date:  2016-01-11       Impact factor: 3.240

2.  Spiking neural circuits with dendritic stimulus processors : encoding, decoding, and identification in reproducing kernel Hilbert spaces.

Authors:  Aurel A Lazar; Yevgeniy B Slutskiy
Journal:  J Comput Neurosci       Date:  2014-09-02       Impact factor: 1.621

3.  Identifying and tracking simulated synaptic inputs from neuronal firing: insights from in vitro experiments.

Authors:  Maxim Volgushev; Vladimir Ilin; Ian H Stevenson
Journal:  PLoS Comput Biol       Date:  2015-03-30       Impact factor: 4.475

4.  Learning neural connectivity from firing activity: efficient algorithms with provable guarantees on topology.

Authors:  Amin Karbasi; Amir Hesam Salavati; Martin Vetterli
Journal:  J Comput Neurosci       Date:  2018-02-20       Impact factor: 1.621

5.  Volterra dendritic stimulus processors and biophysical spike generators with intrinsic noise sources.

Authors:  Aurel A Lazar; Yiyin Zhou
Journal:  Front Comput Neurosci       Date:  2014-09-01       Impact factor: 2.380

6.  Channel identification machines for multidimensional receptive fields.

Authors:  Aurel A Lazar; Yevgeniy B Slutskiy
Journal:  Front Comput Neurosci       Date:  2014-09-26       Impact factor: 2.380

  6 in total

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