Literature DB >> 24205935

Genome sequence of a novel HIV-1 circulating recombinant form (CRF57_BC) identified from Yunnan, China.

Huamian Wei1, Yongjian Liu, Yi Feng, Jenny Hsi, Hui Xing, Xiang He, Lingjie Liao, Takebe Yutaka, Jingyun Li, Yiming Shao.   

Abstract

We identified a novel HIV-1 circulating recombinant form (designated CRF57_BC) from a total of four patients with no obvious epidemiologic linkage in western Yunnan (Dehong prefecture) in China. Two strains (09CN.YNFL37 and 10CN.DHFL17) were identified in this study. An additional two strains (341 and 1439) were found among strains reported in a previous study. CRF57_BC was composed of subtype B and subtype C, with one subtype B segment inserted into the gag region of the subtype C backbone. Subregion tree analysis showed that the B regions originated from a Thai B lineage and the C regions were from an India C lineage. The emergence of CRF57_BC may reflect the continual generation of various forms of intersubtype recombinants in western Yunnan.

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Year:  2014        PMID: 24205935      PMCID: PMC3976592          DOI: 10.1089/aid.2013.0228

Source DB:  PubMed          Journal:  AIDS Res Hum Retroviruses        ISSN: 0889-2229            Impact factor:   2.205


  7 in total

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Authors:  Yongjian Liu; Lin Li; Shaomin Yang; Zuoyi Bao; Hanping Li; Zheng Wang; Daomin Zhuang; Siyang Liu; Lili Chen; Yishan Fan; Min Zhong; Li Gao; Xiaolin Wang; Jingyun Li
Journal:  AIDS Res Hum Retroviruses       Date:  2010-10-26       Impact factor: 2.205

2.  MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0.

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Journal:  Mol Biol Evol       Date:  2007-05-07       Impact factor: 16.240

3.  Near full-length genomic characterization of a novel HIV type 1 CRF07_ BC/01_AE recombinant in men who have sex with men from Sichuan, China.

Authors:  Huamian Wei; Ling Su; Yi Feng; Xiang He; Jenny His; Shu Liang; Yiming Shao
Journal:  AIDS Res Hum Retroviruses       Date:  2013-05-21       Impact factor: 2.205

4.  Identification and characterization of a new class of human immunodeficiency virus type 1 recombinants comprised of two circulating recombinant forms, CRF07_BC and CRF08_BC, in China.

Authors:  Rongge Yang; Shigeru Kusagawa; Chiyu Zhang; Xueshan Xia; Kunlong Ben; Yutaka Takebe
Journal:  J Virol       Date:  2003-01       Impact factor: 5.103

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Authors:  Kok Keng Tee; Oliver G Pybus; Xiao-Jie Li; Xiaoxu Han; Hong Shang; Adeeba Kamarulzaman; Yutaka Takebe
Journal:  J Virol       Date:  2008-07-02       Impact factor: 5.103

6.  Recombination form and epidemiology of HIV-1 unique recombinant strains identified in Yunnan, China.

Authors:  Lin Li; Lili Chen; Shaomin Yang; Tianyi Li; Jianjian Li; Yongjian Liu; Lei Jia; Bihui Yang; Zuoyi Bao; Hanping Li; Xiaolin Wang; Daomin Zhuang; Siyang Liu; Jingyun Li
Journal:  PLoS One       Date:  2012-10-09       Impact factor: 3.240

7.  A comprehensive mapping of HIV-1 genotypes in various risk groups and regions across China based on a nationwide molecular epidemiologic survey.

Authors:  Xiang He; Hui Xing; Yuhua Ruan; Kunxue Hong; Chunlin Cheng; Yuanyuan Hu; Ruolei Xin; Jing Wei; Yi Feng; Jenny H Hsi; Yutaka Takebe; Yiming Shao
Journal:  PLoS One       Date:  2012-10-08       Impact factor: 3.240

  7 in total
  8 in total

Review 1.  HIV Epidemic in Asia: Implications for HIV Vaccine and Other Prevention Trials.

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Journal:  AIDS Res Hum Retroviruses       Date:  2015-06-24       Impact factor: 2.205

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Authors:  Jingwan Han; Siyang Liu; Wei Guo; Zuoyi Bao; Xiaolin Wang; Lin Li; Yongjian Liu; Daomin Zhuang; Hanping Li; Lei Jia; Tao Gui; Hongshuai Sui; Tianyi Li; Jingyun Li
Journal:  PLoS One       Date:  2015-05-27       Impact factor: 3.240

3.  HIV-1 molecular epidemiology among newly diagnosed HIV-1 individuals in Hebei, a low HIV prevalence province in China.

Authors:  Xinli Lu; Xianjiang Kang; Yongjian Liu; Ze Cui; Wei Guo; Cuiying Zhao; Yan Li; Suliang Chen; Jingyun Li; Yuqi Zhang; Hongru Zhao
Journal:  PLoS One       Date:  2017-02-08       Impact factor: 3.240

Review 4.  Geographic Distribution and Temporal Trends of HIV-1 Subtypes through Heterosexual Transmission in China: A Systematic Review and Meta-Analysis.

Authors:  Peipei Xiao; Jianjun Li; Gengfeng Fu; Ying Zhou; Xiping Huan; Haitao Yang
Journal:  Int J Environ Res Public Health       Date:  2017-07-24       Impact factor: 3.390

5.  Characterization of a novel HIV-1 unique recombinant form between CRF07_BC and CRF55_01B in men who have sex with men in Guangzhou, China.

Authors:  Yue Wu; Xuqi Ren; Dan Yin; Haiying Wang; Zhengwei Wan; Xiufen Li; Guifang Hu; Shixing Tang
Journal:  PLoS One       Date:  2017-04-12       Impact factor: 3.240

6.  The prevalence, temporal trends, and geographical distribution of HIV-1 subtypes among men who have sex with men in China: A systematic review and meta-analysis.

Authors:  Yueqi Yin; Yuxiang Liu; Jing Zhu; Xiang Hong; Rui Yuan; Gengfeng Fu; Ying Zhou; Bei Wang
Journal:  Epidemiol Infect       Date:  2019-01       Impact factor: 2.451

7.  Evolving molecular epidemiological profile of human immunodeficiency virus 1 in the southwest border of China.

Authors:  Yingyu Chen; Song Chen; Jun Kang; Hua Fang; Hong Dao; Weizhong Guo; Chunhui Lai; Mingyue Lai; Jianhua Fan; Linchun Fu; Jean-Marie Andrieu; Wei Lu
Journal:  PLoS One       Date:  2014-09-10       Impact factor: 3.240

8.  Extensive Genetic Diversity of HIV-1 in Incident and Prevalent Infections among Malaysian Blood Donors: Multiple Introductions of HIV-1 Genotypes from Highly Prevalent Countries.

Authors:  Wei Zhen Chow; Abdul Hamid Bon; Sheila Keating; Fread Anderios; Hazwan Abdul Halim; Yutaka Takebe; Adeeba Kamarulzaman; Michael P Busch; Kok Keng Tee
Journal:  PLoS One       Date:  2016-08-30       Impact factor: 3.240

  8 in total

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