Literature DB >> 24200330

Identification of Ccr4-not complex components as regulators of transition from partial to genuine induced pluripotent stem cells.

Masayoshi Kamon1, Miyuki Katano, Keiko Hiraki-Kamon, Tomoaki Hishida, Yutaka Nakachi, Yosuke Mizuno, Yasushi Okazaki, Ayumu Suzuki, Masataka Hirasaki, Atsushi Ueda, Masazumi Nishimoto, Hidemasa Kato, Akihiko Okuda.   

Abstract

Somatic cells can be reprogrammed to induced pluripotent stem cells (iPSCs) by defined factors. However, substantial cell numbers subjected to iPSC induction stray from the main reprogramming route and are immortalized as partial iPSCs. These partial iPSCs can become genuine iPSCs by exposure to the ground state condition. However, such conversion is only possible for mouse partial iPSCs, and it is not applicable to human cells. Moreover, the molecular basis of this conversion is completely unknown. Therefore, we performed genome-wide screening with a piggyBac vector to identify genes involved in conversion from partial to genuine iPSCs. This screening led to identification of Cnot2, one of the core components of the Ccr4-Not complex. Subsequent analyses revealed that other core components, Cnot1 and Cnot3, also contributed to the conversion. Thus, our data have uncovered a novel role of core components of the Ccr4-Not complex as regulators of transition from partial to genuine iPSCs.

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Year:  2013        PMID: 24200330      PMCID: PMC4155419          DOI: 10.1089/scd.2013.0326

Source DB:  PubMed          Journal:  Stem Cells Dev        ISSN: 1547-3287            Impact factor:   3.272


  34 in total

1.  Plat-E: an efficient and stable system for transient packaging of retroviruses.

Authors:  S Morita; T Kojima; T Kitamura
Journal:  Gene Ther       Date:  2000-06       Impact factor: 5.250

2.  Polycomb complexes repress developmental regulators in murine embryonic stem cells.

Authors:  Laurie A Boyer; Kathrin Plath; Julia Zeitlinger; Tobias Brambrink; Lea A Medeiros; Tong Ihn Lee; Stuart S Levine; Marius Wernig; Adriana Tajonar; Mridula K Ray; George W Bell; Arie P Otte; Miguel Vidal; David K Gifford; Richard A Young; Rudolf Jaenisch
Journal:  Nature       Date:  2006-04-19       Impact factor: 49.962

3.  A bivalent chromatin structure marks key developmental genes in embryonic stem cells.

Authors:  Bradley E Bernstein; Tarjei S Mikkelsen; Xiaohui Xie; Michael Kamal; Dana J Huebert; James Cuff; Ben Fry; Alex Meissner; Marius Wernig; Kathrin Plath; Rudolf Jaenisch; Alexandre Wagschal; Robert Feil; Stuart L Schreiber; Eric S Lander
Journal:  Cell       Date:  2006-04-21       Impact factor: 41.582

4.  Pluripotency of a single spermatogonial stem cell in mice.

Authors:  Mito Kanatsu-Shinohara; Jiyoung Lee; Kimiko Inoue; Narumi Ogonuki; Hiromi Miki; Shinya Toyokuni; Masahito Ikawa; Tomoyuki Nakamura; Atsuo Ogura; Takashi Shinohara
Journal:  Biol Reprod       Date:  2008-01-16       Impact factor: 4.285

5.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

6.  TRIM28 mediates primer binding site-targeted silencing of murine leukemia virus in embryonic cells.

Authors:  Daniel Wolf; Stephen P Goff
Journal:  Cell       Date:  2007-10-05       Impact factor: 41.582

7.  Bioconductor: open software development for computational biology and bioinformatics.

Authors:  Robert C Gentleman; Vincent J Carey; Douglas M Bates; Ben Bolstad; Marcel Dettling; Sandrine Dudoit; Byron Ellis; Laurent Gautier; Yongchao Ge; Jeff Gentry; Kurt Hornik; Torsten Hothorn; Wolfgang Huber; Stefano Iacus; Rafael Irizarry; Friedrich Leisch; Cheng Li; Martin Maechler; Anthony J Rossini; Gunther Sawitzki; Colin Smith; Gordon Smyth; Luke Tierney; Jean Y H Yang; Jianhua Zhang
Journal:  Genome Biol       Date:  2004-09-15       Impact factor: 13.583

8.  Generation of germline-competent induced pluripotent stem cells.

Authors:  Keisuke Okita; Tomoko Ichisaka; Shinya Yamanaka
Journal:  Nature       Date:  2007-06-06       Impact factor: 49.962

9.  Sequential expression of pluripotency markers during direct reprogramming of mouse somatic cells.

Authors:  Tobias Brambrink; Ruth Foreman; G Grant Welstead; Christopher J Lengner; Marius Wernig; Heikyung Suh; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2008-02-07       Impact factor: 24.633

10.  A molecular roadmap of reprogramming somatic cells into iPS cells.

Authors:  Jose M Polo; Endre Anderssen; Ryan M Walsh; Benjamin A Schwarz; Christian M Nefzger; Sue Mei Lim; Marti Borkent; Effie Apostolou; Sara Alaei; Jennifer Cloutier; Ori Bar-Nur; Sihem Cheloufi; Matthias Stadtfeld; Maria Eugenia Figueroa; Daisy Robinton; Sridaran Natesan; Ari Melnick; Jinfang Zhu; Sridhar Ramaswamy; Konrad Hochedlinger
Journal:  Cell       Date:  2012-12-21       Impact factor: 41.582

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  4 in total

1.  Deregulation of focal adhesion pathway mediated by miR-659-3p is implicated in bone marrow infiltration of stage M neuroblastoma patients.

Authors:  Sara Stigliani; Paola Scaruffi; Corrado Lagazio; Luca Persico; Barbara Carlini; Luigi Varesio; Fabio Morandi; Martina Morini; Anna Rita Gigliotti; Maria Rosaria Esposito; Elisabetta Viscardi; Valerio Cecinati; Massimo Conte; Maria Valeria Corrias
Journal:  Oncotarget       Date:  2015-05-30

2.  CNOT3 suppression promotes necroptosis by stabilizing mRNAs for cell death-inducing proteins.

Authors:  Toru Suzuki; Chisato Kikuguchi; Sahil Sharma; Toshio Sasaki; Miho Tokumasu; Shungo Adachi; Tohru Natsume; Yumi Kanegae; Tadashi Yamamoto
Journal:  Sci Rep       Date:  2015-10-06       Impact factor: 4.379

3.  CNOT3-Dependent mRNA Deadenylation Safeguards the Pluripotent State.

Authors:  Xiaofeng Zheng; Pengyi Yang; Brad Lackford; Brian D Bennett; Li Wang; Hui Li; Yu Wang; Yiliang Miao; Julie F Foley; David C Fargo; Ying Jin; Carmen J Williams; Raja Jothi; Guang Hu
Journal:  Stem Cell Reports       Date:  2016-10-13       Impact factor: 7.765

4.  The CCR4-NOT complex contributes to repression of Major Histocompatibility Complex class II transcription.

Authors:  Alfonso Rodríguez-Gil; Olesja Ritter; Vera V Saul; Jochen Wilhelm; Chen-Yuan Yang; Rudolf Grosschedl; Yumiko Imai; Keiji Kuba; Michael Kracht; M Lienhard Schmitz
Journal:  Sci Rep       Date:  2017-06-14       Impact factor: 4.379

  4 in total

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