Literature DB >> 24193780

A molecular, isozyme and morphological map of the barley (Hordeum vulgare) genome.

A Kleinhofs1, A Kilian, M A Saghai Maroof, R M Biyashev, P Hayes, F Q Chen, N Lapitan, A Fenwick, T K Blake, V Kanazin, E Ananiev, L Dahleen, D Kudrna, J Bollinger, S J Knapp, B Liu, M Sorrells, M Heun, J D Franckowiak, D Hoffman, R Skadsen, B J Steffenson.   

Abstract

A map of the barley genome consisting of 295 loci was constructed. These loci include 152 cDNA restriction fragment length polymorphism (RFLP), 114 genomic DNA RFLP, 14 random amplified polymorphic DNA (RAPD), five isozyme, two morphological, one disease resistance and seven specific amplicon polymorphism (SAP) markers. The RFLP-identified loci include 63 that were detected using cloned known function genes as probes. The map covers 1,250 centiMorgans (cM) with a 4.2 cM average distance between markers. The genetic lengths of the chromosomes range from 124 to 223 cM and are in approximate agreement with their physical lengths. The centromeres were localized to within a few markers on all of the barley chromosomes except chromosome 5. Telomeric regions were mapped for the short (plus) arms of chromosomes 1, 2 and 3 and the long (minus) arm of chromosomes 7.

Entities:  

Year:  1993        PMID: 24193780     DOI: 10.1007/BF00222660

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  16 in total

1.  A comparison of Hordeum bulbosum-mediated haploid production efficiency in barley using in vitro floret and tiller culture.

Authors:  F Q Chen; P M Hayes
Journal:  Theor Appl Genet       Date:  1989-05       Impact factor: 5.699

2.  Construction of an RFLP map of barley.

Authors:  A Graner; A Jahoor; J Schondelmaier; H Siedler; K Pillen; G Fischbeck; G Wenzel; R G Herrmann
Journal:  Theor Appl Genet       Date:  1991-12       Impact factor: 5.699

3.  Sequence-tagged-site-facilitated PCR for barley genome mapping.

Authors:  S Tragoonrung; V Kanazin; P M Hayes; T K Blake
Journal:  Theor Appl Genet       Date:  1992-09       Impact factor: 5.699

4.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  Restriction fragment length polymorphism-mediated targeting of the ml-o resistance locus in barley (Hordeum vulgare).

Authors:  K Hinze; R D Thompson; E Ritter; F Salamini; P Schulze-Lefert
Journal:  Proc Natl Acad Sci U S A       Date:  1991-05-01       Impact factor: 11.205

Review 6.  Construction of a genetic linkage map in man using restriction fragment length polymorphisms.

Authors:  D Botstein; R L White; M Skolnick; R W Davis
Journal:  Am J Hum Genet       Date:  1980-05       Impact factor: 11.025

7.  A partial map of the barley genome incorporating restriction fragment length polymorphism, polymerase chain reaction, isozyme, and morphological marker loci.

Authors:  J S Shin; S Chao; L Corpuz; T Blake
Journal:  Genome       Date:  1990-12       Impact factor: 2.166

8.  The CTAB-DNA precipitation method: a common mini-scale preparation of template DNA from phagemids, phages or plasmids suitable for sequencing.

Authors:  G Del Sal; G Manfioletti; C Schneider
Journal:  Biotechniques       Date:  1989-05       Impact factor: 1.993

9.  Identification and designation of telocentric chromosomes in barley by means of Giemsa N-banding technique.

Authors:  R J Singh; T Tsuchiya
Journal:  Theor Appl Genet       Date:  1982-03       Impact factor: 5.699

10.  MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors:  E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal:  Genomics       Date:  1987-10       Impact factor: 5.736

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  180 in total

1.  The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases.

Authors:  R Brueggeman; N Rostoks; D Kudrna; A Kilian; F Han; J Chen; A Druka; B Steffenson; A Kleinhofs
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-20       Impact factor: 11.205

2.  Genetically engineered stem rust resistance in barley using the Rpg1 gene.

Authors:  Henriette Horvath; Nils Rostoks; Robert Brueggeman; Brian Steffenson; Diter von Wettstein; Andris Kleinhofs
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-30       Impact factor: 11.205

3.  Genetic mapping of Dn7, a rye gene conferring resistance to the Russian wheat aphid in wheat.

Authors:  Garret R Anderson; Dan Papa; Junhua Peng; M Tahir; Nora L V Lapitan
Journal:  Theor Appl Genet       Date:  2003-07-19       Impact factor: 5.699

4.  Mapping and pyramiding of qualitative and quantitative resistance to stripe rust in barley.

Authors:  A J Castro; F Capettini; A E Corey; T Filichkina; P M Hayes; A Kleinhofs; D Kudrna; K Richardson; S Sandoval-Islas; C Rossi; H Vivar
Journal:  Theor Appl Genet       Date:  2003-07-03       Impact factor: 5.699

5.  Synteny perturbations between wheat homoeologous chromosomes caused by locus duplications and deletions correlate with recombination rates.

Authors:  Eduard D Akhunov; Alina R Akhunova; Anna M Linkiewicz; Jorge Dubcovsky; David Hummel; Gerry Lazo; Shiaoman Chao; Olin D Anderson; Jacques David; Lili Qi; Benjamin Echalier; Bikram S Gill; J Perry Gustafson; Mauricio La Rota; Mark E Sorrells; Deshui Zhang; Henry T Nguyen; Venugopal Kalavacharla; Khwaja Hossain; Shahryar F Kianian; Junhua Peng; Nora L V Lapitan; Emily J Wennerlind; Vivienne Nduati; James A Anderson; Deepak Sidhu; Kulvinder S Gill; Patrick E McGuire; Calvin O Qualset; Jan Dvorak
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-05       Impact factor: 11.205

6.  Genome dynamics and evolution of the Mla (powdery mildew) resistance locus in barley.

Authors:  Fusheng Wei; Rod A Wing; Roger P Wise
Journal:  Plant Cell       Date:  2002-08       Impact factor: 11.277

7.  The organization and rate of evolution of wheat genomes are correlated with recombination rates along chromosome arms.

Authors:  Eduard D Akhunov; Andrew W Goodyear; Shu Geng; Li-Li Qi; Benjamin Echalier; Bikram S Gill; J Perry Gustafson; Gerard Lazo; Shiaoman Chao; Olin D Anderson; Anna M Linkiewicz; Jorge Dubcovsky; Mauricio La Rota; Mark E Sorrells; Deshui Zhang; Henry T Nguyen; Venugopal Kalavacharla; Khwaja Hossain; Shahryar F Kianian; Junhua Peng; Nora L V Lapitan; Jose L Gonzalez-Hernandez; James A Anderson; Dong-Woog Choi; Timothy J Close; Muharrem Dilbirligi; Kulvinder S Gill; M Kay Walker-Simmons; Camille Steber; Patrick E McGuire; Calvin O Qualset; Jan Dvorak
Journal:  Genome Res       Date:  2003-04-14       Impact factor: 9.043

8.  Identification and mapping of cleistogamy genes in barley.

Authors:  Y Turuspekov; Y Mano; I Honda; N Kawada; Y Watanabe; T Komatsuda
Journal:  Theor Appl Genet       Date:  2004-05-08       Impact factor: 5.699

9.  High-frequency generation and characterization of intergeneric hybrids and haploids from new wheat-barley crosses.

Authors:  Dávid Polgári; András Cseh; Éva Szakács; Katalin Jäger; Márta Molnár-Láng; László Sági
Journal:  Plant Cell Rep       Date:  2014-04-26       Impact factor: 4.570

10.  Comparative mapping in grasses. Wheat relationships.

Authors:  A E Van Deynze; J C Nelson; E S Yglesias; S E Harrington; D P Braga; S R McCouch; M E Sorrells
Journal:  Mol Gen Genet       Date:  1995-10-25
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