Literature DB >> 24190204

Phylogenetic relationships of turfgrasses as revealed by restriction fragment analysis of chloroplast DNA.

M Yaneshita1, T Ohmura, T Sasakuma, Y Ogihara.   

Abstract

Chloroplast DNAs (cpDNAs) were analyzed in order to clarify the phylogenetic relationships among turfgrasses. Physical maps of cpDNAs from Agrostis stolonifera and Zoysia japonica, which are representative species of cool (C3 type) and warm (C4 type) season turfgrasses, respectively, were constructed with four restriction enzymes, i.e., PstI, SalI, SacI, and XhoI. The genome structures of these cpDNAs were found to be similar to each other in terms of genome size and gene orders, showing thereby a similarity to other grass cpDNAs. CpDNAs of 5 species of cool season turfgrasses and 6 species of warm season turfgrasses as well as four species of cereals, distributed among 14 genera of Gramineae, were digested with PstI, XhoI, and BamHI, and their restriction fragment patterns were compared. Their genome sizes were estimated to be 135-140 kbp. Each species showed characteristic RFLP patterns. On the basis of the frequency of commonly shared fragments, a dendrogram showing the phylogenetic relationships among their cpDNAs was constructed. This dendrogram shows that turfgrasses can be divided into three major groups; these correspond to the subfamilies. Cool and warm season turfgrasses are clearly distinguishable from each other, and the latter can be further classified into two subgroups that correspond to Eragrostoideae and Panicoideae. Our classification of turfgrasses and cereals by RFLP analysis of cpDNA agreed in principal with their conventional taxonomy, except for the location of Festuca and Lolium.

Entities:  

Year:  1993        PMID: 24190204     DOI: 10.1007/BF00223756

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  8 in total

1.  Common features of three inversions in wheat chloroplast DNA.

Authors:  C J Howe; R F Barker; C M Bowman; T A Dyer
Journal:  Curr Genet       Date:  1988-04       Impact factor: 3.886

2.  Preparative and analytical purification of DNA from agarose.

Authors:  B Vogelstein; D Gillespie
Journal:  Proc Natl Acad Sci U S A       Date:  1979-02       Impact factor: 11.205

3.  Rapid transfer of DNA from agarose gels to nylon membranes.

Authors:  K C Reed; D A Mann
Journal:  Nucleic Acids Res       Date:  1985-10-25       Impact factor: 16.971

4.  Diversity and evolution of chloroplast DNA in Triticum and Aegilops as revealed by restriction fragment analysis.

Authors:  Y Ogihara; K Tsunewaki
Journal:  Theor Appl Genet       Date:  1988-09       Impact factor: 5.699

5.  The complete sequence of the rice (Oryza sativa) chloroplast genome: intermolecular recombination between distinct tRNA genes accounts for a major plastid DNA inversion during the evolution of the cereals.

Authors:  J Hiratsuka; H Shimada; R Whittier; T Ishibashi; M Sakamoto; M Mori; C Kondo; Y Honji; C R Sun; B Y Meng
Journal:  Mol Gen Genet       Date:  1989-06

6.  Chloroplast genomes of two conifers lack a large inverted repeat and are extensively rearranged.

Authors:  S H Strauss; J D Palmer; G T Howe; A H Doerksen
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

7.  Chloroplast DNA variation in the grass tribe Festuceae.

Authors:  H Lehväslaiho; A Saura; J Lokki
Journal:  Theor Appl Genet       Date:  1987-07       Impact factor: 5.699

8.  The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.

Authors:  K Shinozaki; M Ohme; M Tanaka; T Wakasugi; N Hayashida; T Matsubayashi; N Zaita; J Chunwongse; J Obokata; K Yamaguchi-Shinozaki; C Ohto; K Torazawa; B Y Meng; M Sugita; H Deno; T Kamogashira; K Yamada; J Kusuda; F Takaiwa; A Kato; N Tohdoh; H Shimada; M Sugiura
Journal:  EMBO J       Date:  1986-09       Impact factor: 11.598

  8 in total
  3 in total

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Authors:  H Budak; R C Shearman; O Gulsen; I Dweikat
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2.  QTL mapping of resistance to gray leaf spot in ryegrass.

Authors:  J Curley; S C Sim; S Warnke; S Leong; R Barker; G Jung
Journal:  Theor Appl Genet       Date:  2005-10-11       Impact factor: 5.699

3.  Transgenic tobacco plants overexpressing a grass PpEXP1 gene exhibit enhanced tolerance to heat stress.

Authors:  Qian Xu; Xiao Xu; Yang Shi; Jichen Xu; Bingru Huang
Journal:  PLoS One       Date:  2014-07-08       Impact factor: 3.240

  3 in total

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