Literature DB >> 24187941

Development of a Standard Reference Material for metabolomics research.

Karen W Phinney1, Guillaume Ballihaut, Mary Bedner, Brandi S Benford, Johanna E Camara, Steven J Christopher, W Clay Davis, Nathan G Dodder, Gauthier Eppe, Brian E Lang, Stephen E Long, Mark S Lowenthal, Elizabeth A McGaw, Karen E Murphy, Bryant C Nelson, Jocelyn L Prendergast, Jessica L Reiner, Catherine A Rimmer, Lane C Sander, Michele M Schantz, Katherine E Sharpless, Lorna T Sniegoski, Susan S-C Tai, Jeanice B Thomas, Thomas W Vetter, Michael J Welch, Stephen A Wise, Laura J Wood, William F Guthrie, Charles R Hagwood, Stefan D Leigh, James H Yen, Nien-Fan Zhang, Madhu Chaudhary-Webb, Huiping Chen, Zia Fazili, Donna J LaVoie, Leslie F McCoy, Shahzad S Momin, Neelima Paladugula, Elizabeth C Pendergrast, Christine M Pfeiffer, Carissa D Powers, Daniel Rabinowitz, Michael E Rybak, Rosemary L Schleicher, Bridgette M H Toombs, Mary Xu, Mindy Zhang, Arthur L Castle.   

Abstract

The National Institute of Standards and Technology (NIST), in collaboration with the National Institutes of Health (NIH), has developed a Standard Reference Material (SRM) to support technology development in metabolomics research. SRM 1950 Metabolites in Human Plasma is intended to have metabolite concentrations that are representative of those found in adult human plasma. The plasma used in the preparation of SRM 1950 was collected from both male and female donors, and donor ethnicity targets were selected based upon the ethnic makeup of the U.S. population. Metabolomics research is diverse in terms of both instrumentation and scientific goals. This SRM was designed to apply broadly to the field, not toward specific applications. Therefore, concentrations of approximately 100 analytes, including amino acids, fatty acids, trace elements, vitamins, hormones, selenoproteins, clinical markers, and perfluorinated compounds (PFCs), were determined. Value assignment measurements were performed by NIST and the Centers for Disease Control and Prevention (CDC). SRM 1950 is the first reference material developed specifically for metabolomics research.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 24187941      PMCID: PMC4823010          DOI: 10.1021/ac402689t

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  52 in total

1.  Rapid and noninvasive diagnosis of the presence and severity of coronary heart disease using 1H-NMR-based metabonomics.

Authors:  Joanne T Brindle; Henrik Antti; Elaine Holmes; George Tranter; Jeremy K Nicholson; Hugh W L Bethell; Sarah Clarke; Peter M Schofield; Elaine McKilligin; David E Mosedale; David J Grainger
Journal:  Nat Med       Date:  2002-11-25       Impact factor: 53.440

Review 2.  Metabonomics: a platform for studying drug toxicity and gene function.

Authors:  Jeremy K Nicholson; John Connelly; John C Lindon; Elaine Holmes
Journal:  Nat Rev Drug Discov       Date:  2002-02       Impact factor: 84.694

Review 3.  Analytical metabolomics: nutritional opportunities for personalized health.

Authors:  Elizabeth M S McNiven; J Bruce German; Carolyn M Slupsky
Journal:  J Nutr Biochem       Date:  2011-11       Impact factor: 6.048

4.  Quantitative analysis of blood plasma metabolites using isotope enhanced NMR methods.

Authors:  G A Nagana Gowda; Fariba Tayyari; Tao Ye; Yuliana Suryani; Siwei Wei; Narasimhamurthy Shanaiah; Daniel Raftery
Journal:  Anal Chem       Date:  2010-09-29       Impact factor: 6.986

5.  Disease pattern recognition in infrared spectra of human sera with diabetes mellitus as an example.

Authors:  W Petrich; B Dolenko; J Früh; M Ganz; H Greger; S Jacob; F Keller; A E Nikulin; M Otto; O Quarder; R L Somorjai; A Staib; G Werner; H Wielinger
Journal:  Appl Opt       Date:  2000-07-01       Impact factor: 1.980

6.  Metabolic profiling of Parkinson's disease: evidence of biomarker from gene expression analysis and rapid neural network detection.

Authors:  Shiek Ssj Ahmed; Winkins Santosh; Suresh Kumar; Hema T Thanka Christlet
Journal:  J Biomed Sci       Date:  2009-07-13       Impact factor: 8.410

7.  Vitamin D and calcium supplementation reduces cancer risk: results of a randomized trial.

Authors:  Joan M Lappe; Dianne Travers-Gustafson; K Michael Davies; Robert R Recker; Robert P Heaney
Journal:  Am J Clin Nutr       Date:  2007-06       Impact factor: 7.045

8.  Application of 1H NMR-based metabonomics in the study of metabolic profiling of human hepatocellular carcinoma and liver cirrhosis.

Authors:  Hongchang Gao; Qiang Lu; Xia Liu; Hui Cong; Liangcai Zhao; Huimin Wang; Donghai Lin
Journal:  Cancer Sci       Date:  2009-04       Impact factor: 6.716

9.  HMDB: the Human Metabolome Database.

Authors:  David S Wishart; Dan Tzur; Craig Knox; Roman Eisner; An Chi Guo; Nelson Young; Dean Cheng; Kevin Jewell; David Arndt; Summit Sawhney; Chris Fung; Lisa Nikolai; Mike Lewis; Marie-Aude Coutouly; Ian Forsythe; Peter Tang; Savita Shrivastava; Kevin Jeroncic; Paul Stothard; Godwin Amegbey; David Block; David D Hau; James Wagner; Jessica Miniaci; Melisa Clements; Mulu Gebremedhin; Natalie Guo; Ying Zhang; Gavin E Duggan; Glen D Macinnis; Alim M Weljie; Reza Dowlatabadi; Fiona Bamforth; Derrick Clive; Russ Greiner; Liang Li; Tom Marrie; Brian D Sykes; Hans J Vogel; Lori Querengesser
Journal:  Nucleic Acids Res       Date:  2007-01       Impact factor: 16.971

Review 10.  Cancer chemoprevention by carotenoids.

Authors:  Takuji Tanaka; Masahito Shnimizu; Hisataka Moriwaki
Journal:  Molecules       Date:  2012-03-14       Impact factor: 4.411

View more
  28 in total

1.  Plasma metabolomics in adults with cystic fibrosis during a pulmonary exacerbation: A pilot randomized study of high-dose vitamin D3 administration.

Authors:  Jessica A Alvarez; Elizabeth Y Chong; Douglas I Walker; Joshua D Chandler; Ellen S Michalski; Ruth E Grossmann; Karan Uppal; Shuzhao Li; Jennifer K Frediani; Rabindra Tirouvanziam; ViLinh T Tran; Vin Tangpricha; Dean P Jones; Thomas R Ziegler
Journal:  Metabolism       Date:  2017-02-11       Impact factor: 8.694

2.  Reference Standardization for Quantification and Harmonization of Large-Scale Metabolomics.

Authors:  Ken H Liu; Mary Nellis; Karan Uppal; Chunyu Ma; ViLinh Tran; Yongliang Liang; Douglas I Walker; Dean P Jones
Journal:  Anal Chem       Date:  2020-06-15       Impact factor: 6.986

3.  The ABRF Metabolomics Research Group 2013 Study: Investigation of Spiked Compound Differences in a Human Plasma Matrix.

Authors:  Amrita K Cheema; John M Asara; Yiwen Wang; Thomas A Neubert; Vladimir Tolstikov; Chris W Turck
Journal:  J Biomol Tech       Date:  2015-09

4.  Metabolomics profile comparisons of irradiated and nonirradiated stored donor red blood cells.

Authors:  Ravi M Patel; John D Roback; Karan Uppal; Tianwei Yu; Dean P Jones; Cassandra D Josephson
Journal:  Transfusion       Date:  2014-10-21       Impact factor: 3.157

5.  Metabolome-wide association study of phenylalanine in plasma of common marmosets.

Authors:  Young-Mi Go; Douglas I Walker; Quinlyn A Soltow; Karan Uppal; Lynn M Wachtman; Fredrick H Strobel; Kurt Pennell; Daniel E L Promislow; Dean P Jones
Journal:  Amino Acids       Date:  2014-12-21       Impact factor: 3.520

6.  Unmetabolized folic acid is detected in nearly all serum samples from US children, adolescents, and adults.

Authors:  Christine M Pfeiffer; Maya R Sternberg; Zia Fazili; Elizabeth A Yetley; David A Lacher; Regan L Bailey; Clifford L Johnson
Journal:  J Nutr       Date:  2014-12-10       Impact factor: 4.798

7.  Interlaboratory analytical comparison of fatty acid concentrations in serum or plasma.

Authors:  Michele M Schantz; Carissa D Powers; Rosemary L Schleicher; Joseph M Betz; Stephen A Wise
Journal:  Clin Chim Acta       Date:  2016-09-20       Impact factor: 3.786

8.  Interlaboratory Reproducibility of a Targeted Metabolomics Platform for Analysis of Human Serum and Plasma.

Authors:  Alexandros P Siskos; Pooja Jain; Werner Römisch-Margl; Mark Bennett; David Achaintre; Yasmin Asad; Luke Marney; Larissa Richardson; Albert Koulman; Julian L Griffin; Florence Raynaud; Augustin Scalbert; Jerzy Adamski; Cornelia Prehn; Hector C Keun
Journal:  Anal Chem       Date:  2016-12-13       Impact factor: 6.986

9.  International Ring Trial of a High Resolution Targeted Metabolomics and Lipidomics Platform for Serum and Plasma Analysis.

Authors:  J Will Thompson; Kendra J Adams; Jerzy Adamski; Yasmin Asad; David Borts; John A Bowden; Gregory Byram; Viet Dang; Warwick B Dunn; Facundo Fernandez; Oliver Fiehn; David A Gaul; Andreas Fr Hühmer; Anastasia Kalli; Therese Koal; Stormy Koeniger; Rupasri Mandal; Florian Meier; Fuad J Naser; Donna O'Neil; Akos Pal; Gary J Patti; Hai Pham-Tuan; Cornelia Prehn; Florence I Raynaud; Tong Shen; Andrew D Southam; Lisa St John-Williams; Karolina Sulek; Catherine G Vasilopoulou; Mark Viant; Catherine L Winder; David Wishart; Lun Zhang; Jiamin Zheng; M Arthur Moseley
Journal:  Anal Chem       Date:  2019-11-08       Impact factor: 6.986

10.  LIQUID: an-open source software for identifying lipids in LC-MS/MS-based lipidomics data.

Authors:  Jennifer E Kyle; Kevin L Crowell; Cameron P Casey; Grant M Fujimoto; Sangtae Kim; Sydney E Dautel; Richard D Smith; Samuel H Payne; Thomas O Metz
Journal:  Bioinformatics       Date:  2017-06-01       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.