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Literature DB >> 24186167

RFLP mapping of partially sequenced leaf cDNA clones in maize.

S Chao¹, C Baysdorfer, O Heredia-Diaz, T Musket, G Xu, E H Coe.

Abstract

We report here the results of mapping a set of 92 leaf cDNA clones in maize. The ends of each of these cDNA clones have previously been partially sequenced, and the sequence comparison has revealed the putative function for 28 clones. It is expected that the RFLP map developed using these expressed sequence tags will be of great importance for future maize genome analysis, such as for PCR-based gene mapping or gene function identification.

Entities: Species

Year: 1994 PMID： 24186167 DOI： 10.1007/BF01253975

Source DB: PubMed Journal: Theor Appl Genet ISSN： 0040-5752 Impact factor: 5.699

10 in total

1. The maize auxotrophic mutant orange pericarp is defective in duplicate genes for tryptophan synthase beta.

Authors: A D Wright; C A Moehlenkamp; G H Perrot; M G Neuffer; K C Cone
Journal: Plant Cell Date: 1992-06 Impact factor: 11.277

2. Basic local alignment search tool.

Authors: S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal: J Mol Biol Date: 1990-10-05 Impact factor: 5.469

3. Sequence-tagged-site-facilitated PCR for barley genome mapping.

Authors: S Tragoonrung; V Kanazin; P M Hayes; T K Blake
Journal: Theor Appl Genet Date: 1992-09 Impact factor: 5.699

4. Strategies in cDNA programs.

Authors: J D Grausz; C Auffray
Journal: Genomics Date: 1993-08 Impact factor: 5.736

5. Finding new genes faster than ever.

Authors: J M Sikela; C Auffray
Journal: Nat Genet Date: 1993-03 Impact factor: 38.330

6. Restriction fragment length polymorphism analysis of polymerase chain reaction products amplified from mapped loci of rice (Oryza sativa L.) genomic DNA.

Authors: M N Williams; N Pande; S Nair; M Mohan; J Bennett
Journal: Theor Appl Genet Date: 1991-07 Impact factor: 5.699

7. A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers.

Authors: A Konieczny; F M Ausubel
Journal: Plant J Date: 1993-08 Impact factor: 6.417

8. Development of a core RFLP map in maize using an immortalized F2 population.

Authors: J M Gardiner; E H Coe; S Melia-Hancock; D A Hoisington; S Chao
Journal: Genetics Date: 1993-07 Impact factor: 4.562

9. Partial sequence analysis of 130 randomly selected maize cDNA clones.

Authors: C S Keith; D O Hoang; B M Barrett; B Feigelman; M C Nelson; H Thai; C Baysdorfer
Journal: Plant Physiol Date: 1993-01 Impact factor: 8.340

10. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

Authors: E S Lander; P Green; J Abrahamson; A Barlow; M J Daly; S E Lincoln; L A Newberg; L Newburg
Journal: Genomics Date: 1987-10 Impact factor: 5.736

10 in total

9 in total

1. Refined mapping of the Pierce's disease resistance locus, PdR1, and Sex on an extended genetic map of Vitis rupestris x V. arizonica.

Authors: S Riaz; A F Krivanek; K Xu; M A Walker
Journal: Theor Appl Genet Date: 2006-09-08 Impact factor: 5.699

2. Comparative genetic mapping between duplicated segments on maize chromosomes 3 and 8 and homoeologous regions in sorghum and sugarcane.

Authors: P Dufour; L Grivet; A D'Hont; M Deu; G Trouche; J C Glaszmann; P Hamon
Journal: Theor Appl Genet Date: 1996-06 Impact factor: 5.699

RFLP mapping of partially sequenced leaf cDNA clones in maize.

1. The maize auxotrophic mutant orange pericarp is defective in duplicate genes for tryptophan synthase beta.

2. Basic local alignment search tool.

3. Sequence-tagged-site-facilitated PCR for barley genome mapping.

4. Strategies in cDNA programs.

5. Finding new genes faster than ever.

6. Restriction fragment length polymorphism analysis of polymerase chain reaction products amplified from mapped loci of rice (Oryza sativa L.) genomic DNA.

7. A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers.

8. Development of a core RFLP map in maize using an immortalized F2 population.

9. Partial sequence analysis of 130 randomly selected maize cDNA clones.

10. MAPMAKER: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations.

1. Refined mapping of the Pierce's disease resistance locus, PdR1, and Sex on an extended genetic map of Vitis rupestris x V. arizonica.

2. Comparative genetic mapping between duplicated segments on maize chromosomes 3 and 8 and homoeologous regions in sorghum and sugarcane.

3. The distribution of genes in the genomes of Gramineae.

4. Genetic map of artichoke × wild cardoon: toward a consensus map for Cynara cardunculus.

5. Functionally associated molecular genetic marker map construction in perennial ryegrass (Lolium perenne L.).

6. QTL analysis and comparative genomics of herbage quality traits in perennial ryegrass (Lolium perenne L.).

7. Genome mapping of polyploid tall fescue (Festuca arundinacea Schreb.) with RFLP markers.

8. Detection of segregation distortions in an indica-japonica rice cross using a high-resolution molecular map.

9. Rice PHYC gene: structure, expression, map position and evolution.