Literature DB >> 24185347

Effect of sampling scale on the assessment of epiphytic bacterial populations.

L L Kinkel1, M Wilson, S E Lindow.   

Abstract

Bacterial populations on above-ground plant surfaces were estimated at three different biological scales, including leaflet disks, entire leaflets, and whole plants. The influence of sample scale on the estimation of mean bacterial population size per unit and per gram and on the variability among sampling units was quantified at each scale. Populations were highly variable among sampling units at every scale examined, suggesting that there is no optimal scale at which sample variance is reduced. The distribution of population sizes among sample units was sometimes, but not consistently, described by the lognormal. Regardless of the sampling scale, expression of population sizes on a per gram basis may not reduce variance, because population size was not generally a function of sample unit weight within any single sampling scale. In addition, the data show that scaling populations on a per gram basis does not provide a useful means of comparing population estimates from samples taken at different scales. The implications of these results for designing sampling strategies to address specific issues in microbial ecology are discussed.

Year:  1995        PMID: 24185347     DOI: 10.1007/BF00164891

Source DB:  PubMed          Journal:  Microb Ecol        ISSN: 0095-3628            Impact factor:   4.552


  8 in total

1.  Aerial Dispersal and Epiphytic Survival of Pseudomonas syringae during a Pretest for the Release of Genetically Engineered Strains into the Environment.

Authors:  S E Lindow; G R Knudsen; R J Seidler; M V Walter; V W Lambou; P S Amy; D Schmedding; V Prince; S Hern
Journal:  Appl Environ Microbiol       Date:  1988-06       Impact factor: 4.792

2.  Lognormal distribution of epiphytic bacterial populations on leaf surfaces.

Authors:  S S Hirano; E V Nordheim; D C Arny; C D Upper
Journal:  Appl Environ Microbiol       Date:  1982-09       Impact factor: 4.792

3.  Competitive Exclusion of Epiphytic Bacteria by IcePseudomonas syringae Mutants.

Authors:  S E Lindow
Journal:  Appl Environ Microbiol       Date:  1987-10       Impact factor: 4.792

4.  Evaluation of methods for sampling, recovery, and enumeration of bacteria applied to the phylloplane.

Authors:  K Donegan; C Matyac; R Seidler; A Porteous
Journal:  Appl Environ Microbiol       Date:  1991-01       Impact factor: 4.792

5.  Colonization of soybean buds by bacteria: observations with the scanning electron microscope.

Authors:  C Leben
Journal:  Can J Microbiol       Date:  1969-03       Impact factor: 2.419

6.  Influence of humidity on the migration of bacteria on cucumber seedlings.

Authors:  C Leben
Journal:  Can J Microbiol       Date:  1965-08       Impact factor: 2.419

7.  Ice nucleation temperature of individual leaves in relation to population sizes of ice nucleation active bacteria and frost injury.

Authors:  S S Hirano; L S Baker; C D Upper
Journal:  Plant Physiol       Date:  1985-02       Impact factor: 8.340

8.  Positional variation in phylloplane microbial populations within an apple tree canopy.

Authors:  J H Andrews; C M Kenerley; E V Nordheim
Journal:  Microb Ecol       Date:  1980-03       Impact factor: 4.552

  8 in total
  15 in total

1.  Biological sensor for sucrose availability: relative sensitivities of various reporter genes.

Authors:  W G Miller; M T Brandl; B Quiñones; S E Lindow
Journal:  Appl Environ Microbiol       Date:  2001-03       Impact factor: 4.792

2.  Frequency, size, and localization of bacterial aggregates on bean leaf surfaces.

Authors:  J-M Monier; S E Lindow
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

3.  Geographical location determines the population structure in phyllosphere microbial communities of a salt-excreting desert tree.

Authors:  Omri M Finkel; Adrien Y Burch; Steven E Lindow; Anton F Post; Shimshon Belkin
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

4.  Appetite of an epiphyte: quantitative monitoring of bacterial sugar consumption in the phyllosphere.

Authors:  J H Leveau; S E Lindow
Journal:  Proc Natl Acad Sci U S A       Date:  2001-03-13       Impact factor: 11.205

5.  Role of leaf surface sugars in colonization of plants by bacterial epiphytes.

Authors:  J Mercier; S E Lindow
Journal:  Appl Environ Microbiol       Date:  2000-01       Impact factor: 4.792

6.  Bacterial colonization of the phyllosphere of mediterranean perennial species as influenced by leaf structural and chemical features.

Authors:  R K P Yadav; K Karamanoli; D Vokou
Journal:  Microb Ecol       Date:  2005-10-13       Impact factor: 4.552

7.  Genome-wide identification of Pseudomonas syringae genes required for fitness during colonization of the leaf surface and apoplast.

Authors:  Tyler C Helmann; Adam M Deutschbauer; Steven E Lindow
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-04       Impact factor: 11.205

8.  Contribution of nitrate assimilation to the fitness of Pseudomonas syringae pv. syringae B728a on plants.

Authors:  Audrey Parangan-Smith; Steven Lindow
Journal:  Appl Environ Microbiol       Date:  2012-11-16       Impact factor: 4.792

9.  Effect of the surfactant tween 80 on the detachment and dispersal of Salmonella enterica serovar Thompson single cells and aggregates from cilantro leaves as revealed by image analysis.

Authors:  Maria T Brandl; Steven Huynh
Journal:  Appl Environ Microbiol       Date:  2014-06-06       Impact factor: 4.792

Review 10.  Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae-a pathogen, ice nucleus, and epiphyte.

Authors:  S S Hirano; C D Upper
Journal:  Microbiol Mol Biol Rev       Date:  2000-09       Impact factor: 11.056

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