Literature DB >> 24182948

Stabilizing the foundation of the house that 'omics builds: the evolving value of cultured isolates to marine microbiology.

Michael S Rappé1.   

Abstract

The value of cultivating microbial strains that are representative of abundant microorganisms in situ is generally acknowledged amongst marine microbial ecologists, primarily because they provide the means to determine phenotypic properties and detailed physiological characteristics of living cells in a controlled setting. In the shadow of the rapid, ongoing expansion in environmental genomic, transcriptomic, and proteomic surveys of marine systems, a minor resurgence in experiments designed to isolate and grow free-living marine microorganisms has met some success. Interestingly, the most immediate impact that many of the resulting strains have had on our understanding of marine microbial communities has not resulted from experiments aimed to interrogate cellular physiology, but rather from their sequenced genomes. It is predicted, however, that their prolonged impact on marine ecology will result from basic laboratory research that links cellular physiology with its molecular underpinnings.
Copyright © 2013 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2013        PMID: 24182948     DOI: 10.1016/j.mib.2013.09.009

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  5 in total

1.  Expansion of Cultured Bacterial Diversity by Large-Scale Dilution-to-Extinction Culturing from a Single Seawater Sample.

Authors:  Seung-Jo Yang; Ilnam Kang; Jang-Cheon Cho
Journal:  Microb Ecol       Date:  2015-11-14       Impact factor: 4.552

2.  Artificial Seawater Media Facilitate Cultivating Members of the Microbial Majority from the Gulf of Mexico.

Authors:  Michael W Henson; David M Pitre; Jessica Lee Weckhorst; V Celeste Lanclos; Austen T Webber; J Cameron Thrash
Journal:  mSphere       Date:  2016-04-27       Impact factor: 4.389

3.  The first complete genome sequences of the acI lineage, the most abundant freshwater Actinobacteria, obtained by whole-genome-amplification of dilution-to-extinction cultures.

Authors:  Ilnam Kang; Suhyun Kim; Md Rashedul Islam; Jang-Cheon Cho
Journal:  Sci Rep       Date:  2017-02-10       Impact factor: 4.379

4.  Single cell genomes of Prochlorococcus, Synechococcus, and sympatric microbes from diverse marine environments.

Authors:  Paul M Berube; Steven J Biller; Thomas Hackl; Shane L Hogle; Brandon M Satinsky; Jamie W Becker; Rogier Braakman; Sara B Collins; Libusha Kelly; Jessie Berta-Thompson; Allison Coe; Kristin Bergauer; Heather A Bouman; Thomas J Browning; Daniele De Corte; Christel Hassler; Yotam Hulata; Jeremy E Jacquot; Elizabeth W Maas; Thomas Reinthaler; Eva Sintes; Taichi Yokokawa; Debbie Lindell; Ramunas Stepanauskas; Sallie W Chisholm
Journal:  Sci Data       Date:  2018-09-04       Impact factor: 6.444

5.  Isolation of SAR11 Marine Bacteria from Cryopreserved Seawater.

Authors:  Elizabeth A Monaghan; Kelle C Freel; Michael S Rappé
Journal:  mSystems       Date:  2020-12-22       Impact factor: 6.496

  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.