Literature DB >> 24182113

Diffracted X-ray tracking for monitoring intramolecular motion in individual protein molecules using broad band X-ray.

Kouhei Ichiyanagi1, Hiroshi Sekiguchi, Masato Hoshino, Kentaro Kajiwara, Kentaro Hoshisashi, Jae-won Chang, Maki Tokue, Yufuku Matsushita, Masaki Nishijima, Yoshihisa Inoue, Yasunori Senba, Haruhiko Ohashi, Noboru Ohta, Naoto Yagi, Yuji C Sasaki.   

Abstract

Diffracted X-ray tracking (DXT) enables the tilting and twisting motions of single protein molecules to be monitored with micro- to milliradian resolution using a highly brilliant X-ray source with a wide energy bandwidth. We have developed a technique to monitor single molecules using gold nanocrystals attached to individual protein molecules using the BL28B2 beamline at SPring-8. In this paper we present the installation of a single toroidal X-ray mirror at BL28B2 to focus X-rays in an energy range of 10-20 keV (ΔE/E = 82% for an X-ray with a wide energy bandwidth). With this beamline we tracked diffraction spots from gold nanocrystals over a wide angle range than that using quasi-monochromatic X-rays. Application of the wide angle DXT technique to biological systems enabled us to observe the on-site motions of single protein molecules that have been functionalized in vivo. We further extend the capability of DXT by observing the fractional tilting and twisting motions of inner proteins under various conditions. As a proof of this methodology and to determine instrumental performance the intramolecular motions of a human serum albumin complex with 2-anthracenecarboxylic acid was investigated using the BL28B2 beamline. The random tilting and twisting intramolecular motions are shown to be directly linked to the movement of individual protein molecules in the buffer solution.

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Year:  2013        PMID: 24182113     DOI: 10.1063/1.4819305

Source DB:  PubMed          Journal:  Rev Sci Instrum        ISSN: 0034-6748            Impact factor:   1.523


  3 in total

1.  Nonequilibrium magnetic response of anisotropic superparamagnetic nanoparticles and possible artifacts in magnetic particle imaging.

Authors:  Hiroaki Mamiya; Balachandran Jeyadevan
Journal:  PLoS One       Date:  2015-03-16       Impact factor: 3.240

2.  Real time ligand-induced motion mappings of AChBP and nAChR using X-ray single molecule tracking.

Authors:  Hiroshi Sekiguchi; Yasuhito Suzuki; Yuri Nishino; Suzuko Kobayashi; Yoshiko Shimoyama; Weiyan Cai; Kenji Nagata; Masato Okada; Kouhei Ichiyanagi; Noboru Ohta; Naoto Yagi; Atsuo Miyazawa; Tai Kubo; Yuji C Sasaki
Journal:  Sci Rep       Date:  2014-09-16       Impact factor: 4.379

3.  Time-resolved X-ray Tracking of Expansion and Compression Dynamics in Supersaturating Ion-Networks.

Authors:  Y Matsushita; H Sekiguchi; K Ichiyanagi; N Ohta; K Ikezaki; Y Goto; Y C Sasaki
Journal:  Sci Rep       Date:  2015-12-14       Impact factor: 4.379

  3 in total

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