Literature DB >> 24173922

Intra- and inter-specific variations in Lens revealed by RAPD markers.

A Abo-Elwafa1, K Murai, T Shimada.   

Abstract

Randomly amplified polymorphic DNA (RAPD) markers were used to estimate intra- and interspecific variations in the genus Lens (lentil). Twenty cultivars of L. culinaris ssp. culinaris, including 11 microsperma (small-seeded) and nine macrosperma (large-seeded) types, and 16 wild relatives (four accessions each of L. culinaris ssp. orientalis, L. odemensis, L. nigricans and L. ervoides), were evaluated for genetic variability using a set of 40 random 10-mer primers. Fifty reproducibly scorable DNA bands were observed from ten of the primers, 90% of which were polymorphic. Genetic distances between each of the accessions were calculated from simple matching coefficients. A dendrogram showing genetic relationships between them was constructed by an unweighted pair-group method with arithmetical averages (UPGMA). This study revealed that (1) expect for L. ervoides, the level of intraspecific variation in cultivated lentil is lower than that in wild species, (2) L. culinaris ssp. orientalis is the most likely candidate for a progenitor of the cultivated species, and (3) microsperma and macrosperma cultivars were indistinguishable by the RAPD markers identified here.

Entities:  

Year:  1995        PMID: 24173922     DOI: 10.1007/BF00221974

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  16 in total

1.  Random amplified polymorphic DNA and pedigree relationships in spring barley.

Authors:  N A Tinker; M G Fortin; D E Mather
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

2.  Identification of apple cultivars using RAPD markers.

Authors:  B Koller; A Lehmann; J M McDermott; C Gessler
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

3.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

4.  Rapid isolation of high molecular weight plant DNA.

Authors:  M G Murray; W F Thompson
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

5.  Fingerprinting genomes using PCR with arbitrary primers.

Authors:  J Welsh; M McClelland
Journal:  Nucleic Acids Res       Date:  1990-12-25       Impact factor: 16.971

6.  Using randomly amplified polymorphic DNA for evaluating genetic relationships among papaya cultivars.

Authors:  J I Stiles; C Lemme; S Sondur; M B Morshidi; R Manshardt
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

7.  Genetic variation detected with RAPD markers among upland and lowland rice cultivars (Oryza sativa L.).

Authors:  L X Yu; H T Nguyen
Journal:  Theor Appl Genet       Date:  1994-01       Impact factor: 5.699

8.  Discrimination among cultivars of rapeseed (Brassica napus L.) using DNA polymorphisms amplified from arbitrary primers.

Authors:  R J Mailer; R Scarth; B Fristensky
Journal:  Theor Appl Genet       Date:  1994-01       Impact factor: 5.699

9.  Phenetic relationships and levels of variability detected by restriction fragment length polymorphism and random amplified polymorphic DNA analysis of cultivated and wild accessions of Lycopersicon esculentum.

Authors:  C E Williams; D A Clair
Journal:  Genome       Date:  1993-06       Impact factor: 2.166

10.  Potential use of random amplified polymorphic DNA (RAPD) technique to study the genetic diversity in Indian mustard (Brassica juncea) and its relationship to heterosis.

Authors:  A Jain; S Bhatia; S S Banga; S Prakash; M Lakshmikumaran
Journal:  Theor Appl Genet       Date:  1994-04       Impact factor: 5.699

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  14 in total

1.  An intersubspecific genetic map of Lens.

Authors:  Y Durán; R Fratini; P García; M Pérez de la Vega
Journal:  Theor Appl Genet       Date:  2003-12-16       Impact factor: 5.699

2.  AFLP analysis of the diversity and phylogeny of Lens and its comparison with RAPD analysis.

Authors:  S K Sharma; M R Knox; T H Ellis
Journal:  Theor Appl Genet       Date:  1996-10       Impact factor: 5.699

3.  Random amplified polymorphic DNA (RAPD) markers in hop, Humulus lupulus: level of genetic variability and segregation in F1 progeny.

Authors:  M Pillay; S T Kenny
Journal:  Theor Appl Genet       Date:  1996-03       Impact factor: 5.699

4.  Characterization of genetic diversity and population structure of Moroccan lentil cultivars and landraces using molecular markers.

Authors:  Joseph Mbasani-Mansi; Mounia Ennami; Fatima Zahra Briache; Fatima Gaboun; Nadia Benbrahim; Zine El Abidine Triqui; Rachid Mentag
Journal:  Physiol Mol Biol Plants       Date:  2019-05-21

5.  Identification of Lens culinaris ssp. culinaris chromosomes by physical mapping of repetitive DNA sequences.

Authors:  I Galasso; T Schmidt; D Pignone
Journal:  Chromosome Res       Date:  2001       Impact factor: 5.239

6.  Genetic relationships in Lens species and parentage determination of their interspecific hybrids using RAPD markers.

Authors:  M Ahmad; D L McNeil; A G Fautrier; K F Armstrong; A M Paterson
Journal:  Theor Appl Genet       Date:  1996-06       Impact factor: 5.699

7.  Comparison of crossability, RAPD, SDS-PAGE and morphological markers for revealing genetic relationships within and among Lens species.

Authors:  M Ahmad; D L McNeil
Journal:  Theor Appl Genet       Date:  1996-10       Impact factor: 5.699

8.  Analysis of genetic structure and interrelationships in lentil species using morphological and SSR markers.

Authors:  Priyanka Mohan Koul; Vikas Sharma; Maneet Rana; Rakesh K Chahota; Shiv Kumar; Tilak R Sharma
Journal:  3 Biotech       Date:  2017-05-12       Impact factor: 2.893

Review 9.  Current knowledge in lentil genomics and its application for crop improvement.

Authors:  Shiv Kumar; Karthika Rajendran; Jitendra Kumar; Aladdin Hamwieh; Michael Baum
Journal:  Front Plant Sci       Date:  2015-02-23       Impact factor: 5.753

10.  Genetic Diversity in Lens Species Revealed by EST and Genomic Simple Sequence Repeat Analysis.

Authors:  Harsh Kumar Dikshit; Akanksha Singh; Dharmendra Singh; Muraleedhar Sidaram Aski; Prapti Prakash; Neelu Jain; Suresh Meena; Shiv Kumar; Ashutosh Sarker
Journal:  PLoS One       Date:  2015-09-18       Impact factor: 3.240

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