Literature DB >> 24173068

Chromosome localization and characterization of a family of long interspersed repetitive DNA elements from the genus Zea.

R Aledo1, R Raz, A Monfort, C M Vicient, P Puigdomènech, J A Martínez-Izquierdo.   

Abstract

This paper describes the characterization and chromosomal distribution of new long repetitive sequences present in all species of the genus Zea. These sequences constitute a family of moderately repetitive elements ranging approximately from 1350 to 1700 copies per haploid genome in modern maize (Zea mays ssp. mays) and teosinte (Zea diploperennis), respectively. The elements are long, probably larger than 9 kb, and they show a highly conserved internal organization among Zea subspecies and species. The elements are present in all maize chromosomes in an interspersed pattern of distribution, are absent from centromeric and pericentric heterochromatin, and with some clustering in the distal regions of chromosome arms.

Entities:  

Year:  1995        PMID: 24173068     DOI: 10.1007/BF00222927

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  20 in total

Review 1.  Retroelements in higher plants.

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Journal:  Trends Genet       Date:  1992-03       Impact factor: 11.639

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Authors:  C M Tito; L Poggio; C A Naranjo
Journal:  Theor Appl Genet       Date:  1991-11       Impact factor: 5.699

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Authors:  D L Lee; T H Ellis; L Turner; R P Hellens; W G Cleary
Journal:  Plant Mol Biol       Date:  1990-11       Impact factor: 4.076

4.  Phylogenetic relationships of reverse transcriptase and RNase H sequences and aspects of genome structure in the gypsy group of retrotransposons.

Authors:  M S Springer; R J Britten
Journal:  Mol Biol Evol       Date:  1993-11       Impact factor: 16.240

5.  A simple method of reducing the fading of immunofluorescence during microscopy.

Authors:  G D Johnson; G M Nogueira Araujo
Journal:  J Immunol Methods       Date:  1981       Impact factor: 2.303

6.  BARE-1, a copia-like retroelement in barley (Hordeum vulgare L.).

Authors:  I Manninen; A H Schulman
Journal:  Plant Mol Biol       Date:  1993-08       Impact factor: 4.076

7.  Cloning and characterization of ribosomal RNA genes from wheat and barley.

Authors:  W L Gerlach; J R Bedbrook
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

8.  A new family of repetitive nucleotide sequences is restricted to the genus Zea.

Authors:  R Raz; P Puigdomènech; J A Martínez-Izquierdo
Journal:  Gene       Date:  1991-09-15       Impact factor: 3.688

9.  Dialect-I, species-specific repeated DNA sequence from barley, Hordeum vulgare.

Authors:  N V Sonina; A A Lushnikova; A P Tihonov; E V Ananiev
Journal:  Theor Appl Genet       Date:  1989-10       Impact factor: 5.699

10.  Frequent transpositions of Drosophila melanogaster HeT-A transposable elements to receding chromosome ends.

Authors:  H Biessmann; L E Champion; M O'Hair; K Ikenaga; B Kasravi; J M Mason
Journal:  EMBO J       Date:  1992-12       Impact factor: 11.598

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  6 in total

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Authors:  Elisenda Ramallo; Ruslan Kalendar; Alan H Schulman; José A Martínez-Izquierdo
Journal:  Plant Mol Biol       Date:  2007-11-22       Impact factor: 4.076

2.  Grande retrotransposons contain an accessory gene in the unusually long 3'-internal region that encodes a nuclear protein transcribed from its own promoter.

Authors:  Eva Gómez-Orte; Carlos M Vicient; José Antonio Martínez-Izquierdo
Journal:  Plant Mol Biol       Date:  2013-02-20       Impact factor: 4.076

3.  Divergence of satellite DNA and interspersion of dispersed repeats in the genome of the wild beet Beta procumbens.

Authors:  Daryna Dechyeva; Frank Gindullis; Thomas Schmidt
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

4.  CIRE1, a novel transcriptionally active Ty1-copia retrotransposon from Citrus sinensis.

Authors:  Laura Rico-Cabanas; José A Martínez-Izquierdo
Journal:  Mol Genet Genomics       Date:  2007-01-10       Impact factor: 3.291

5.  High-throughput retrotransposon-based genetic diversity of maize germplasm assessment and analysis.

Authors:  Marwa Ghonaim; Ruslan Kalendar; Hoda Barakat; Nahla Elsherif; Naglaa Ashry; Alan H Schulman
Journal:  Mol Biol Rep       Date:  2020-01-09       Impact factor: 2.316

6.  A new family of dispersed repeats from Brassica nigra: characterization and localization.

Authors:  R Kapila; M S Negi; P This; M Delseny; P S Srivastava; M Lakshmikumaran
Journal:  Theor Appl Genet       Date:  1996-11       Impact factor: 5.699

  6 in total

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