Literature DB >> 24173061

The identification of duplicate accessions within a rice germplasm collection using RAPD analysis.

P S Virk1, H J Newbury, M T Jackson, B V Ford-Lloyd.   

Abstract

A set of accessions of Oryza sativa from the International Rice Research Institute (Philippines) that included known and suspected duplicates as well as closely related germplasm has been subjected to RAPD analysis. The number of primers, the number of polymorphic bands and the total number of bands were determined that will allow the accurate discrimination of these categories of accessions, including the identification of true and suspected duplicates. Two procedures have been described that could be employed on a more general basis for identifying duplicates in genetic resources collections, and further discussion on the values of such activities is presented.

Entities:  

Year:  1995        PMID: 24173061     DOI: 10.1007/BF00222920

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  6 in total

1.  Potential taxonomic use of random amplified polymorphic DNA (RAPD): a case study in Brassica.

Authors:  T Demeke; R P Adams; R Chibbar
Journal:  Theor Appl Genet       Date:  1992-09       Impact factor: 5.699

2.  The use of RAPD for identifying and classifying Musa germplasm.

Authors:  E C Howell; H J Newbury; R L Swennen; L A Withers; B V Ford-Lloyd
Journal:  Genome       Date:  1994-04       Impact factor: 2.166

3.  The detection of disease clustering and a generalized regression approach.

Authors:  N Mantel
Journal:  Cancer Res       Date:  1967-02       Impact factor: 12.701

4.  Use of RAPD for the study of diversity within plant germplasm collections.

Authors:  P S Virk; B V Ford-Lloyd; M T Jackson; H J Newbury
Journal:  Heredity (Edinb)       Date:  1995-02       Impact factor: 3.821

5.  Genetic variation in agronomically important species of Stylosanthes determined using random amplified polymorphic DNA markers.

Authors:  K Kazan; J M Manners; D F Cameron
Journal:  Theor Appl Genet       Date:  1993-02       Impact factor: 5.699

6.  Genome relationships among Lotus species based on random amplified polymorphic DNA (RAPD).

Authors:  L P Campos; J V Raelson; W F Grant
Journal:  Theor Appl Genet       Date:  1994-06       Impact factor: 5.699

  6 in total
  9 in total

1.  Random Amplified Polymorphic DNA (RAPD) and Derived Techniques.

Authors:  Kantipudi Nirmal Babu; Thotten Elampilay Sheeja; Divakaran Minoo; Muliyar Krishna Rajesh; Kukkamgai Samsudeen; Erinjery Jose Suraby; Illathidath Payatatti Vijesh Kumar
Journal:  Methods Mol Biol       Date:  2021

Review 2.  Conservation of rice genetic resources: the role of the International Rice Genebank at IRRI.

Authors:  M T Jackson
Journal:  Plant Mol Biol       Date:  1997-09       Impact factor: 4.076

3.  AveDissR: An R function for assessing genetic distinctness and genetic redundancy.

Authors:  Mo-Hua Yang; Yong-Bi Fu
Journal:  Appl Plant Sci       Date:  2017-07-24       Impact factor: 1.936

4.  Geographical patterns of genetic variation in the world collections of wild annual Cicer characterized by amplified fragment length polymorphisms.

Authors:  F Shan; H C Clarke; J A Plummer; G Yan; K H M Siddique
Journal:  Theor Appl Genet       Date:  2004-11-16       Impact factor: 5.699

5.  A comparative study of genetic relationships among the AA-genome Oryza species using RAPD and SSR markers.

Authors:  Fugang Ren; Bao-Rong Lu; Shaoqing Li; Jingyu Huang; Yingguo Zhu
Journal:  Theor Appl Genet       Date:  2003-09-19       Impact factor: 5.699

6.  Genetic Diversity Assessment of Rarely Cultivated Traditional Indica Rice (Oryza sativa L.) Varieties.

Authors:  T Rekha; Kottackal Poulose Martin; V B Sreekumar; Joseph Madassery
Journal:  Biotechnol Res Int       Date:  2011-07-12

7.  A platform for efficient genotyping in Musa using microsatellite markers.

Authors:  Pavla Christelová; Miroslav Valárik; Eva Hřibová; Ines Van den Houwe; Stéphanie Channelière; Nicolas Roux; Jaroslav Doležel
Journal:  AoB Plants       Date:  2011-08-22       Impact factor: 3.276

Review 8.  Genomic resources in mungbean for future breeding programs.

Authors:  Sue K Kim; Ramakrishnan M Nair; Jayern Lee; Suk-Ha Lee
Journal:  Front Plant Sci       Date:  2015-08-10       Impact factor: 5.753

9.  Genetic variability analysis of partially salt tolerant local and inbred rice (Oryza sativa L.) through molecular markers.

Authors:  Sonia Rani Mazumder; Hammadul Hoque; Beethi Sinha; Woasifur Rahman Chowdhury; Md Nazmul Hasan; Shamsul H Prodhan
Journal:  Heliyon       Date:  2020-08-26
  9 in total

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