Literature DB >> 24169969

DNA fingerprinting detects genetic variability in the pearl millet downy mildew pathogen (Sclerospora graminicola).

J G Sastry1, W Ramakrishna, S Sivaramakrishnan, R P Thakur, V S Gupta, P K Ranjekar.   

Abstract

Genetic variability in six host genotype-specific pathotypes of pearl millet downy mildew pathogen S. graminicola was studied at the molecular level using mini- and micro-satellites. Our results indicated that microsatellites (GAA)6, (GACA)4, and especially (GATA)4 were quite informative and showed high levels of polymorphism among the pathotypes. The six pathotypes could be classified into five groups based on the cluster analysis of their genetic similarities, thereby confirming the existence of distinct host genotype-specific virulence in S. graminicola pathotypes. We demonstrate, for the first time, the use of DNA fingerprinting to detect genetic variation in downy mildew fungus of pearl millet.

Entities:  

Year:  1995        PMID: 24169969     DOI: 10.1007/BF00223892

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  20 in total

1.  DNA fingerprinting to detect genetic variation in rice using hypervariable DNA sequences.

Authors:  W Ramakrishna; K V Chowdari; M D Lagu; V S Gupta; P K Ranjekar
Journal:  Theor Appl Genet       Date:  1995-06       Impact factor: 5.699

2.  The inheritance of restriction fragment length polymorphisms in the flax rust Melampsora lini.

Authors:  P A Anderson; G J Lawrence; A Pryor
Journal:  Theor Appl Genet       Date:  1992-09       Impact factor: 5.699

3.  Individual-specific 'fingerprints' of human DNA.

Authors:  A J Jeffreys; V Wilson; S L Thein
Journal:  Nature       Date:  1985 Jul 4-10       Impact factor: 49.962

Review 4.  On simple repeated GATCA sequences in animal genomes: a critical reappraisal.

Authors:  J T Epplen
Journal:  J Hered       Date:  1988 Nov-Dec       Impact factor: 2.645

5.  A new multi-locus DNA fingerprinting probe: pV47-2.

Authors:  J L Longmire; P M Kraemer; N C Brown; L C Hardekopf; L L Deaven
Journal:  Nucleic Acids Res       Date:  1990-03-25       Impact factor: 16.971

6.  Optimized oligonucleotide probes for DNA fingerprinting.

Authors:  R Schäfer; H Zischler; U Birsner; A Becker; J T Epplen
Journal:  Electrophoresis       Date:  1988-08       Impact factor: 3.535

7.  Host species-specific conservation of a family of repeated DNA sequences in the genome of a fungal plant pathogen.

Authors:  J E Hamer; L Farrall; M J Orbach; B Valent; F G Chumley
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

8.  Simple sequences are ubiquitous repetitive components of eukaryotic genomes.

Authors:  D Tautz; M Renz
Journal:  Nucleic Acids Res       Date:  1984-05-25       Impact factor: 16.971

9.  DNA fingerprinting and analysis of population structure in the chestnut blight fungus, Cryphonectria parasitica.

Authors:  M G Milgroom; S E Lipari; W A Powell
Journal:  Genetics       Date:  1992-06       Impact factor: 4.562

10.  DNA Fingerprinting with a Dispersed Repeated Sequence Resolves Pathotype Diversity in the Rice Blast Fungus.

Authors:  M. Levy; J. Romao; M. A. Marchetti; J. E. Hamer
Journal:  Plant Cell       Date:  1991-01       Impact factor: 11.277

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  3 in total

1.  Genetic variability of Fusarium wilt pathogen isolates of chickpea (Cicer arietinum L.) assessed by molecular markers.

Authors:  S Sivaramakrishnan; Seetha Kannan; S D Singh
Journal:  Mycopathologia       Date:  2002       Impact factor: 2.574

2.  Potential of (GATA)n microsatellites from rice for inter- and intra-specific variability studies.

Authors:  A P Davierwala; W Ramakrishna; V Chowdari; P K Ranjekar; V S Gupta
Journal:  BMC Evol Biol       Date:  2001-10-16       Impact factor: 3.260

3.  Simple sequence repeat markers useful for sorghum downy mildew (Peronosclerospora sorghi) and related species.

Authors:  Ramasamy Perumal; Padmavathi Nimmakayala; Saradha R Erattaimuthu; Eun-Gyu No; Umesh K Reddy; Louis K Prom; Gary N Odvody; Douglas G Luster; Clint W Magill
Journal:  BMC Genet       Date:  2008-11-29       Impact factor: 2.797

  3 in total

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