Literature DB >> 24169777

A genetic map of potato (Solanum tuberosum) integrating molecular markers, including transposons, and classical markers.

J M Jacobs1, H J Van Eck, P Arens, B Verkerk-Bakker, B Te Lintel Hekkert, H J Bastiaanssen, A El-Kharbotly, A Pereira, E Jacobsen, W J Stiekema.   

Abstract

A genetic map of potato (Solanum tuberosum L.) integrating molecular markers with morphological and isozyme markers was constructed using a backcross population of 67 diploid potato plants. A general method for map construction is described that differs from previous methods employed in potato and other outbreeding plants. First, separate maps for the female and male parents were constructed. The female map contained 132 markers, whereas the male map contained 138 markers. Second, on the basis of the markers in common the two integrated parental maps were combined into one with the computer programme JoinMap. This combined map consisted of 175 molecular markers, 10 morphological markers and 8 isozyme markers. Ninety-two of the molecular markers were derived from DNA sequences flanking either T-DNA inserts in potato or reintegrated maize transposable elements originating from these T-DNA constructs. Clusters of distorted segregation were found on chromosomes 1,2,8 and 11 for the male parent and chromosome 5 for both parents. The total length of the combined map is 1120 cM.

Entities:  

Year:  1995        PMID: 24169777     DOI: 10.1007/BF00220891

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  22 in total

1.  High density molecular linkage maps of the tomato and potato genomes.

Authors:  S D Tanksley; M W Ganal; J P Prince; M C de Vicente; M W Bonierbale; P Broun; T M Fulton; J J Giovannoni; S Grandillo; G B Martin
Journal:  Genetics       Date:  1992-12       Impact factor: 4.562

2.  High efficiency transformation of E. coli by high voltage electroporation.

Authors:  W J Dower; J F Miller; C W Ragsdale
Journal:  Nucleic Acids Res       Date:  1988-07-11       Impact factor: 16.971

3.  A procedure for in vitro amplification of DNA segments that lie outside the boundaries of known sequences.

Authors:  T Triglia; M G Peterson; D J Kemp
Journal:  Nucleic Acids Res       Date:  1988-08-25       Impact factor: 16.971

4.  Multiple alleles for tuber shape in diploid potato detected by qualitative and quantitative genetic analysis using RFLPs.

Authors:  H J Van Eck; J M Jacobs; P Stam; J Ton; W J Stiekema; E Jacobsen
Journal:  Genetics       Date:  1994-05       Impact factor: 4.562

5.  DrawMap: a computer program for drawing genetic linkage maps.

Authors:  J W van Ooijen
Journal:  J Hered       Date:  1994 Jan-Feb       Impact factor: 2.645

6.  Activity of the promoter of the Lhca3.St.1 gene, encoding the potato apoprotein 2 of the light-harvesting complex of Photosystem I, in transgenic potato and tobacco plants.

Authors:  J P Nap; M van Spanje; W G Dirkse; G Baarda; L Mlynarova; A Loonen; P Grondhuis; W J Stiekema
Journal:  Plant Mol Biol       Date:  1993-11       Impact factor: 4.076

7.  Mapping of loci involved in quantitatively inherited resistance to the potato cyst-nematode Globodera rostochiensis pathotype Ro1.

Authors:  C M Kreike; J R de Koning; J H Vinke; J W van Ooijen; C Gebhardt; W J Stiekema
Journal:  Theor Appl Genet       Date:  1993-12       Impact factor: 5.699

8.  Quantitative resistance to Phytophthora infestans in potato: a case study for QTL mapping in an allogamous plant species.

Authors:  C Leonards-Schippers; W Gieffers; R Schäfer-Pregl; E Ritter; S J Knapp; F Salamini; C Gebhardt
Journal:  Genetics       Date:  1994-05       Impact factor: 4.562

9.  RFLP analysis and linkage mapping in Solanum tuberosum.

Authors:  C Gebhardt; E Ritter; T Debener; U Schachtschabel; B Walkemeier; H Uhrig; F Salamini
Journal:  Theor Appl Genet       Date:  1989-07       Impact factor: 5.699

10.  Location of the recessive gene ym (yellow margin) on chromosome 12 of diploid Solatium tuberosum by means of trisomic analysis.

Authors:  M Wagenvoort
Journal:  Theor Appl Genet       Date:  1982-09       Impact factor: 5.699

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  32 in total

1.  Construction of a 10,000-marker ultradense genetic recombination map of potato: providing a framework for accelerated gene isolation and a genomewide physical map.

Authors:  Hans van Os; Sandra Andrzejewski; Erin Bakker; Imanol Barrena; Glenn J Bryan; Bernard Caromel; Bilal Ghareeb; Edwige Isidore; Walter de Jong; Paul van Koert; Véronique Lefebvre; Dan Milbourne; Enrique Ritter; Jeroen N A M Rouppe van der Voort; Françoise Rousselle-Bourgeois; Joke van Vliet; Robbie Waugh; Richard G F Visser; Jaap Bakker; Herman J van Eck
Journal:  Genetics       Date:  2006-04-02       Impact factor: 4.562

2.  Construction of genetic linkage maps and comparative genome analysis of catfish using gene-associated markers.

Authors:  Huseyin Kucuktas; Shaolin Wang; Ping Li; Chongbo He; Peng Xu; Zhenxia Sha; Hong Liu; Yanliang Jiang; Puttharat Baoprasertkul; Benjaporn Somridhivej; Yaping Wang; Jason Abernathy; Ximing Guo; Lei Liu; William Muir; Zhanjiang Liu
Journal:  Genetics       Date:  2009-01-26       Impact factor: 4.562

3.  Pollen markers for gene-centromere mapping in diploid potato.

Authors:  H J Bastiaanssen; M S Ramanna; Z Sawor; A Mincione; A V Steen; E Jacobsen
Journal:  Theor Appl Genet       Date:  1996-11       Impact factor: 5.699

4.  Inheritance and genetic mapping of tuber eye depth in cultivated diploid potatoes.

Authors:  Xiu-Qing Li; Hielke De Jong; Darlene M De Jong; Walter S De Jong
Journal:  Theor Appl Genet       Date:  2005-02-18       Impact factor: 5.699

5.  Segregation and linkage analysis of 75 novel microsatellite DNA markers in pair crosses of Japanese abalone (Haliotis discus hannai) using the 5'-tailed primer method.

Authors:  Masashi Sekino; Toshimasa Kobayashi; Motoyuki Hara
Journal:  Mar Biotechnol (NY)       Date:  2006-07-27       Impact factor: 3.619

Review 6.  Gene silencing in potato: allelic differences and effect of ploidy.

Authors:  A M Wolters; R G Visser
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

7.  Identification of agronomically important QTL in tetraploid potato cultivars using a marker-trait association analysis.

Authors:  Björn B D'hoop; Paul L C Keizer; M João Paulo; Richard G F Visser; Fred A van Eeuwijk; Herman J van Eck
Journal:  Theor Appl Genet       Date:  2014-01-10       Impact factor: 5.699

8.  Characterization and high-resolution mapping of a late blight resistance locus similar to R2 in potato.

Authors:  T H Park; V G A A Vleeshouwers; D J Huigen; E A G van der Vossen; H J van Eck; R G F Visser
Journal:  Theor Appl Genet       Date:  2005-05-21       Impact factor: 5.699

9.  Sequencing of cDNA clones from the genetic map of tomato (Lycopersicon esculentum).

Authors:  M W Ganal; R Czihal; U Hannappel; D U Kloos; A Polley; H Q Ling
Journal:  Genome Res       Date:  1998-08       Impact factor: 9.043

10.  Chromatin structure and physical mapping of chromosome 6 of potato and comparative analyses with tomato.

Authors:  Marina Iovene; Susan M Wielgus; Philipp W Simon; C Robin Buell; Jiming Jiang
Journal:  Genetics       Date:  2008-09-14       Impact factor: 4.562

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