Literature DB >> 24167065

Effect of pressure on the stability of G-quadruplex DNA: thermodynamics under crowding conditions.

Shuntaro Takahashi1, Naoki Sugimoto.   

Abstract

Under pressure: A DNA G-quadruplex was unfolded under high pressure, but crowding conditions repressed this effect owing to enthalpic contributions. Volumetric analysis showed that ethylene glycol or poly(ethylene glycol) decreased the volume change of the transition by more than fourfold owing to the alteration of the number and/or radii of hydrating water molecules.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA structures; G-quadruplexes; gene expression; high pressure; thermodynamics

Mesh：

Substances：

Year:  2013        PMID： 24167065     DOI： 10.1002/anie.201307714

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN： 1433-7851            Impact factor:   15.336


  12 in total

1.  Exploring the effects of cosolutes and crowding on the volumetric and kinetic profile of the conformational dynamics of a poly dA loop DNA hairpin: a single-molecule FRET study.

Authors:  Satyajit Patra; Vitor Schuabb; Irena Kiesel; Jim-Marcel Knop; Rosario Oliva; Roland Winter
Journal:  Nucleic Acids Res       Date:  2019-01-25       Impact factor: 16.971

2.  Hidden intermediates in Mango III RNA aptamer folding revealed by pressure perturbation.

Authors:  Balasubramanian Harish; Jinqiu Wang; Eric J Hayden; Bastian Grabe; Wolf Hiller; Roland Winter; Catherine A Royer
Journal:  Biophys J       Date:  2021-12-28       Impact factor: 4.033

3.  Solvent Vibrations as a Proxy of the Telomere G-Quadruplex Rearrangements across Thermal Unfolding.

Authors:  Valeria Libera; Federico Bianchi; Barbara Rossi; Francesco D'Amico; Claudio Masciovecchio; Caterina Petrillo; Francesco Sacchetti; Alessandro Paciaroni; Lucia Comez
Journal:  Int J Mol Sci       Date:  2022-05-04       Impact factor: 6.208

4.  Alteration of the Conformational Dynamics of a DNA Hairpin by α-Synuclein in the Presence of Aqueous Two-Phase Systems.

Authors:  Sanjib K Mukherjee; Jim-Marcel Knop; Simone Möbitz; Roland H A Winter
Journal:  Chemistry       Date:  2020-08-06       Impact factor: 5.236

5.  DNA G-Wire Formation Using an Artificial Peptide is Controlled by Protease Activity.

Authors:  Kenji Usui; Arisa Okada; Shungo Sakashita; Masayuki Shimooka; Takaaki Tsuruoka; Shu-Ichi Nakano; Daisuke Miyoshi; Tsukasa Mashima; Masato Katahira; Yoshio Hamada
Journal:  Molecules       Date:  2017-11-16       Impact factor: 4.411

6.  Negative volume changes of human G-quadruplexes at unfolding.

Authors:  Orsolya Réka Molnár; Judit Somkuti; László Smeller
Journal:  Heliyon       Date:  2020-12-13

7.  B-DNA Structure and Stability: The Role of Nucleotide Composition and Order.

Authors:  Celine Nieuwland; Trevor A Hamlin; Célia Fonseca Guerra; Giampaolo Barone; F Matthias Bickelhaupt
Journal:  ChemistryOpen       Date:  2022-01-27       Impact factor: 2.630

8.  Characterization of a G-quadruplex from hepatitis B virus and its stabilization by binding TMPyP4, BRACO19 and PhenDC3.

Authors:  Orsolya Réka Molnár; András Végh; Judit Somkuti; László Smeller
Journal:  Sci Rep       Date:  2021-12-01       Impact factor: 4.379

9.  Ground- and excited-state dynamic control of an anion receptor by hydrostatic pressure.

Authors:  Tomokazu Kinoshita; Yohei Haketa; Hiromitsu Maeda; Gaku Fukuhara
Journal:  Chem Sci       Date:  2021-04-15       Impact factor: 9.825

10.  Temperature and pressure limits of guanosine monophosphate self-assemblies.

Authors:  Mimi Gao; Balasubramanian Harish; Melanie Berghaus; Rana Seymen; Loana Arns; Scott A McCallum; Catherine A Royer; Roland Winter
Journal:  Sci Rep       Date:  2017-08-29       Impact factor: 4.379
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.