Literature DB >> 24166398

Ribosomal DNA variations in Erianthus, a wild sugarcane relative (Andropogoneae-Saccharinae).

P Besse1, C L McIntyre, N Berding.   

Abstract

Variation at the 18S+26S and 5S ribosomal DNA loci was assessed on 62 Erianthus Michx. clones, representing 11 species, and 15 clones from two Saccharum L. species used as a reference. Genus-specific markers for Erianthus Michx. sect. Ripidium Henrard (Old World species) were identified. Ribosomal DNA units in Erianthus sect. Ripidium exhibited an additional BamHI site compared to Saccharum, and 5S units showed length and restriction-site differences between Erianthus and Saccharum. These markers will be useful to follow introgression in Saccharum x Erianthus hybrids. Six ribosomal units (for 18+26S genes) were revealed in Erianthus sect. Ripidium, differing by restriction-site positions and/or length. These results provided new information on species relationships and evolution within the genus Erianthus. The Indonesian and Indian forms of E. arundinaceus (Retz.) Jeswiet gave different restriction patterns, which were similar to those of E. bengalense (Retz.) R. C. Bharadwaja and E. procerus (Roxb.) Raizade, respectively. The two 2n=20 species, E. ele-phantinus Hook.f. and E. ravennae (L.) P. Beauv., could also be differentiated at this locus. Two of the New World Erianthus species studied, E. rufipilus (Steud.) Griseb. and E. longisetosus Andersson, appeared more like Erianthus sect. Ripidium, whereas E. trinii Hack, and E. brevibardis Michx. showed patterns consistent with Miscanthus sinensis Andersson and S. spontaneum L., respectively. Finally, the comparison of rDNA restriction maps among Erianthus sect. Ripidium, Saccharum, sorghum and maize, led to unexpected conclusions concerning the relationships between the different genera and the position of Erianthus in the "Saccharum complex".

Entities:  

Year:  1996        PMID: 24166398     DOI: 10.1007/BF00226096

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  18 in total

1.  Ribosomal RNA genes in plants: variability in copy number and in the intergenic spacer.

Authors:  S O Rogers; A J Bendich
Journal:  Plant Mol Biol       Date:  1987-09       Impact factor: 4.076

2.  Grain isozyme and ribosomal DNA variability in Hordeum spontaneum populations from Israel.

Authors:  K J Chalmers; R Waugh; J Watters; B P Forster; E Nevo; R J Abbott; W Powell
Journal:  Theor Appl Genet       Date:  1992-07       Impact factor: 5.699

3.  Ribosomal DNA variation in finger millet and wild species of Eleusine (Poaceae).

Authors:  K W Hilu; J L Johnson
Journal:  Theor Appl Genet       Date:  1992-04       Impact factor: 5.699

4.  A second locus for the 5S multigene family in Secale L.: sequence divergence in two lineages of the family.

Authors:  P Reddy; R Appels
Journal:  Genome       Date:  1989-06       Impact factor: 2.166

5.  Cloning and characterization of ribosomal RNA genes from wheat and barley.

Authors:  W L Gerlach; J R Bedbrook
Journal:  Nucleic Acids Res       Date:  1979-12-11       Impact factor: 16.971

6.  Genomic organization of the ribosomal DNA of sorghum and its close relatives.

Authors:  P S Springer; E A Zimmer; J L Bennetzen
Journal:  Theor Appl Genet       Date:  1989-06       Impact factor: 5.699

7.  Ribosomal DNA variations in wild and cultivated rubber tree (Hevea brasiliensis).

Authors:  P Besse; M Seguin; P Lebrun; C Lanaud
Journal:  Genome       Date:  1993-12       Impact factor: 2.166

8.  Phylogenetic relationships of Triticum tauschii, the D-genome donor to hexaploid wheat. 4. Variation and chromosomal location of 5S DNA.

Authors:  E S Lagudah; B C Clarke; R Appels
Journal:  Genome       Date:  1989-12       Impact factor: 2.166

9.  Identification and characterisation of sugarcane intergeneric hybrids, Saccharum officinarum x Erianthus arundinaceus, with molecular markers and DNA in situ hybridisation.

Authors:  A D'Hont; P S Rao; P Feldmann; L Grivet; N Islam-Faridi; P Taylor; J C Glaszmann
Journal:  Theor Appl Genet       Date:  1995-07       Impact factor: 5.699

10.  Ribosomal gene spacer length variability in cultivated and wild rice species.

Authors:  F Cordesse; G Second; M Delseny
Journal:  Theor Appl Genet       Date:  1990-01       Impact factor: 5.699

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  3 in total

1.  Complete Chloroplast Genomes of Erianthus arundinaceus and Miscanthus sinensis: Comparative Genomics and Evolution of the Saccharum Complex.

Authors:  Shin-Ichi Tsuruta; Masumi Ebina; Makoto Kobayashi; Wataru Takahashi
Journal:  PLoS One       Date:  2017-01-26       Impact factor: 3.240

2.  How genetic variation is affected by geographic environments and ploidy level in Erianthus arundinaceus?

Authors:  Jianbo Zhang; Jiajun Yan; Xiaoyun Shen; Dan Chang; Shiqie Bai; Yu Zhang; Jin Zhang
Journal:  PLoS One       Date:  2017-05-30       Impact factor: 3.240

3.  Molecular insights of genetic variation in Erianthus arundinaceus populations native to China.

Authors:  Jianbo Zhang; Jiajun Yan; Yunwei Zhang; Xiao Ma; Shiqie Bai; Yanqi Wu; Zhixue Dao; Daxu Li; Changbing Zhang; Yu Zhang; Minghong You; Fuyu Yang; Jin Zhang
Journal:  PLoS One       Date:  2013-11-25       Impact factor: 3.240

  3 in total

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