Literature DB >> 24166115

Rapid identification of white-Engelmann spruce species by RAPD markers.

P D Khasa1, B P Dancik.   

Abstract

Fragments of random amplified polymorphic DNA (RAPDs) were used as markers to distinguish Picea glauca (Moench) Voss (white spruce) and Picea engelmannii Parry (Engelmann spruce). These species and their putative hybrids are difficult to differentiate morphologically and are collectively known as interior spruce. Four oligodeoxynucleotide decamer primers showed species-specific amplification products between white spruce and Engelmann spruce. These fragments are highly conserved among seed lots and individual trees of each species from diverse geographic origins. The consistency and reproducibility of these species-specific amplification products were tested in more than two amplification reactions. Therefore, RAPD markers can provide genetic markers for easy and rapid identification of the specific genetic entry of these spruce species and their reported putative hybrids. According to the frequencies of the species-specific RAPD markers, it is possible to estimate the hybrid fraction, indicative of true introgression between the two species. These results are useful for quick identification of both species and their hybrid swarms at any stage in the sporophyte phase of the life cycle, for determining the occurrence and the magnitude of introgressive hybridization in an overlap zone between the two species, and for certification purposes in operational re-forestation and tree-improvement programs.

Entities:  

Year:  1996        PMID: 24166115     DOI: 10.1007/BF00222950

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  19 in total

1.  Storage protein changes during zygotic embryogenesis in interior spruce.

Authors:  B S Flinn; D R Roberts; D T Webb; B C Sutton
Journal:  Tree Physiol       Date:  1991-01       Impact factor: 4.196

2.  Differentiation of poplar and willow clones using RAPD fingerprints.

Authors:  D Lin; M Hubbes; L Zsuffa
Journal:  Tree Physiol       Date:  1994-10       Impact factor: 4.196

3.  Parentage determination in maize hybrids using the arbitrarily primed polymerase chain reaction (AP-PCR).

Authors:  J Welsh; R J Honeycutt; M McClelland; B W Sobral
Journal:  Theor Appl Genet       Date:  1991-07       Impact factor: 5.699

4.  DNA polymorphisms amplified by arbitrary primers are useful as genetic markers.

Authors:  J G Williams; A R Kubelik; K J Livak; J A Rafalski; S V Tingey
Journal:  Nucleic Acids Res       Date:  1990-11-25       Impact factor: 16.971

5.  Rapid isolation of high molecular weight plant DNA.

Authors:  M G Murray; W F Thompson
Journal:  Nucleic Acids Res       Date:  1980-10-10       Impact factor: 16.971

6.  Classifying seedlots of Picea sitchensis and P. glauca in zones of introgression using restriction analysis of chloroplast DNA.

Authors:  A E Szmidt; Y A El-Kassaby; A Sigurgeirsson; T Aldèn; D Lindgren; J E Hällgren
Journal:  Theor Appl Genet       Date:  1988-12       Impact factor: 5.699

7.  Targeted mapping and linkage analysis of morphological isozyme, and RAPD markers in peach.

Authors:  J X Chaparro; D J Werner; D O'Malley; R R Sederoff
Journal:  Theor Appl Genet       Date:  1994-02       Impact factor: 5.699

8.  A partial genetic linkage map of slash pine (Pinus elliottii Engelm. var. elliottii) based on random amplified polymorphic DNAs.

Authors:  C D Nelson; W L Nance; R L Doudrick
Journal:  Theor Appl Genet       Date:  1993-10       Impact factor: 5.699

9.  Preliminary karyotype and chromosomal localization of ribosomal DNA sites in white spruce using fluorescence in situ hybridization.

Authors:  G R Brown; V Amarasinghe; G Kiss; J E Carlson
Journal:  Genome       Date:  1993-04       Impact factor: 2.166

10.  Species-specific RAPD fingerprints for the closely related Picea mariana and P. rubens.

Authors:  M Perron; A G Gordon; J Bousquet
Journal:  Theor Appl Genet       Date:  1995-07       Impact factor: 5.699

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  3 in total

1.  SCAR makers and multiplex PCR-based rapid molecular typing of Lentinula edodes strains.

Authors:  Xueqian Wu; Haibo Li; Weiwei Zhao; Lizhong Fu; Huazheng Peng; Liang He; Junwen Cheng; Hailong Wei; Qingqi Wu
Journal:  Curr Microbiol       Date:  2010-04-01       Impact factor: 2.188

2.  Ice-age endurance: DNA evidence of a white spruce refugium in Alaska.

Authors:  Lynn L Anderson; Feng Sheng Hu; David M Nelson; Rémy J Petit; Ken N Paige
Journal:  Proc Natl Acad Sci U S A       Date:  2006-08-07       Impact factor: 11.205

3.  Generation and characterization of SCARs by cloning and sequencing of RAPD products: a strategy for species-specific marker development in bamboo.

Authors:  Malay DAS; Samik Bhattacharya; Amita Pal
Journal:  Ann Bot       Date:  2005-02-24       Impact factor: 4.357

  3 in total

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