Literature DB >> 24158799

Modeling of G protein-coupled receptors using crystal structures: from monomers to signaling complexes.

Angel Gonzalez1, Arnau Cordomí, Minos Matsoukas, Julian Zachmann, Leonardo Pardo.   

Abstract

G protein-coupled receptors constitute a large and functionally diverse family of transmembrane proteins. They are fundamental in the transfer of extracellular stimuli to intracellular signaling pathways and are among the most targeted proteins in drug discovery. Recent advances in crystallization methods have permitted to resolve the molecular structure of several members of the family. This chapter focuses on the impact of these structures in the use of homology modeling techniques for building three-dimensional models of homologous G protein-coupled receptors, higher order oligomers, and their complexes with ligands and signaling proteins.

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Year:  2014        PMID: 24158799     DOI: 10.1007/978-94-007-7423-0_2

Source DB:  PubMed          Journal:  Adv Exp Med Biol        ISSN: 0065-2598            Impact factor:   2.622


  5 in total

Review 1.  Substitution scoring matrices for proteins - An overview.

Authors:  Rakesh Trivedi; Hampapathalu Adimurthy Nagarajaram
Journal:  Protein Sci       Date:  2020-10-12       Impact factor: 6.725

Review 2.  The receptor concept in 3D: from hypothesis and metaphor to GPCR-ligand structures.

Authors:  Albert J Kooistra; Chris de Graaf; Henk Timmerman
Journal:  Neurochem Res       Date:  2014-08-08       Impact factor: 3.996

3.  GPCRtm: An amino acid substitution matrix for the transmembrane region of class A G Protein-Coupled Receptors.

Authors:  Santiago Rios; Marta F Fernandez; Gianluigi Caltabiano; Mercedes Campillo; Leonardo Pardo; Angel Gonzalez
Journal:  BMC Bioinformatics       Date:  2015-07-02       Impact factor: 3.169

4.  Identifying human diamine sensors for death related putrescine and cadaverine molecules.

Authors:  Cristina Izquierdo; José C Gómez-Tamayo; Jean-Christophe Nebel; Leonardo Pardo; Angel Gonzalez
Journal:  PLoS Comput Biol       Date:  2018-01-11       Impact factor: 4.475

5.  Receptor residence time trumps drug-likeness and oral bioavailability in determining efficacy of complement C5a antagonists.

Authors:  Vernon Seow; Junxian Lim; Adam J Cotterell; Mei-Kwan Yau; Weijun Xu; Rink-Jan Lohman; W Mei Kok; Martin J Stoermer; Matthew J Sweet; Robert C Reid; Jacky Y Suen; David P Fairlie
Journal:  Sci Rep       Date:  2016-04-20       Impact factor: 4.379

  5 in total

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