Literature DB >> 24157060

Evaluation of a new real-time reverse transcription polymerase chain reaction assay for detection of norovirus in fecal specimens.

Jungwon Hyun1, Hyun Soo Kim2, Han-Sung Kim1, Kyu Man Lee1.   

Abstract

A new real-time reverse transcription polymerase chain reaction (RT-PCR) assay, the AccuPower Norovirus Real-time RT-PCR Kit, was evaluated in detection of human norovirus in stool specimens. Studies for detection limit, dynamic range, reproducibility, and cross-reactivity were performed. A total of 281 fecal specimens were tested using the AccuPower Norovirus Real-time RT-PCR Kit, and the results were compared with those obtained using another real-time RT-PCR system. Norovirus positivity and genotype were confirmed by direct sequencing. The lowest mean numbers of genome copies of GI and GII that could be detected by the assay were 12.3 and 5.6 RNA copies/reaction, respectively. The positive, negative, and overall percent agreements between the 2 real-time PCR assays were 99.0% (96/97), 95.1% (175/184), and 96.4% (271/281), respectively. The AccuPower Norovirus Real-time RT-PCR system showed good analytical and clinical performance and may be a useful diagnostic tool for norovirus infection.
© 2013.

Entities:  

Keywords:  Comparison; Evaluation; Genotype; Norovirus; Real-time PCR

Mesh:

Year:  2013        PMID: 24157060     DOI: 10.1016/j.diagmicrobio.2013.09.013

Source DB:  PubMed          Journal:  Diagn Microbiol Infect Dis        ISSN: 0732-8893            Impact factor:   2.803


  5 in total

Review 1.  Norovirus.

Authors:  Elizabeth Robilotti; Stan Deresinski; Benjamin A Pinsky
Journal:  Clin Microbiol Rev       Date:  2015-01       Impact factor: 26.132

2.  Evaluation of real-time RT-PCR assays for detection and quantification of norovirus genogroups I and II.

Authors:  Kitwadee Rupprom; Porntip Chavalitshewinkoon-Petmitr; Pornphan Diraphat; Leera Kittigul
Journal:  Virol Sin       Date:  2017-02-20       Impact factor: 4.327

3.  Molecular epidemiology of norovirus in asymptomatic food handlers in Busan, Korea, and emergence of genotype GII.17.

Authors:  Hee Soo Koo; Mi Ok Lee; Pyeong Tae Ku; Su Jeong Hwang; Dong Ju Park; Hyung Suk Baik
Journal:  J Microbiol       Date:  2016-09-30       Impact factor: 3.422

4.  Evaluation of RIDA®GENE norovirus GI/GII real time RT-PCR using stool specimens collected from children and adults with acute gastroenteritis.

Authors:  N Kanwar; F Hassan; L Barclay; C Langley; J Vinjé; P W Bryant; K St George; L Mosher; J M Matthews-Greer; M A Rocha; D O Beenhouwer; C J Harrison; M Moffatt; N Shastri; R Selvarangan
Journal:  J Clin Virol       Date:  2018-04-10       Impact factor: 3.168

5.  Exploration of the metal coordination region of concanavalin A for its interaction with human norovirus.

Authors:  Duwoon Kim; Hee-Min Lee; Kyung-Seo Oh; Ah Young Ki; Rachael A Protzman; Dongkyun Kim; Jong-Soon Choi; Min Ji Kim; Sung Hyun Kim; Bipin Vaidya; Seung Jae Lee; Joseph Kwon
Journal:  Biomaterials       Date:  2017-03-06       Impact factor: 12.479

  5 in total

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