Literature DB >> 24148657

Identification and developmental expression of the enzymes responsible for dopamine, histamine, octopamine and serotonin biosynthesis in the copepod crustacean Calanus finmarchicus.

Andrew E Christie1, Tiana M Fontanilla2, Vittoria Roncalli2, Matthew C Cieslak2, Petra H Lenz2.   

Abstract

Neurochemicals are likely to play key roles in physiological/behavioral control in the copepod crustacean Calanus finmarchicus, the biomass dominant zooplankton for much of the North Atlantic Ocean. Previously, a de novo assembled transcriptome consisting of 206,041 unique sequences was used to characterize the peptidergic signaling systems of Calanus. Here, this assembly was mined for transcripts encoding enzymes involved in amine biosynthesis. Using known Drosophila melanogaster proteins as templates, transcripts encoding putative Calanus homologs of tryptophan-phenylalanine hydroxylase (dopamine, octopamine and serotonin biosynthesis), tyrosine hydroxylase (dopamine biosynthesis), DOPA decarboxylase (dopamine and serotonin biosynthesis), histidine decarboxylase (histamine biosynthesis), tyrosine decarboxylase (octopamine biosynthesis), tyramine β-hydroxylase (octopamine biosynthesis) and tryptophan hydroxylase (serotonin biosynthesis) were identified. Reverse BLAST and domain analyses show that the proteins deduced from these transcripts possess sequence homology to and the structural hallmarks of their respective enzyme families. Developmental profiling revealed a remarkably consistent pattern of expression for all transcripts, with the highest levels of expression typically seen in the early nauplius and early copepodite. These expression patterns suggest roles for amines during development, particularly in the metamorphic transitions from embryo to nauplius and from nauplius to copepodite. Taken collectively, the data presented here lay a strong foundation for future gene-based studies of aminergic signaling in this and other copepod species, in particular assessment of the roles they may play in developmental control.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Functional genomics; Illumina sequencing; de novo transcriptome assembly; in silico transcriptome mining

Mesh:

Substances:

Year:  2013        PMID: 24148657      PMCID: PMC3872210          DOI: 10.1016/j.ygcen.2013.10.003

Source DB:  PubMed          Journal:  Gen Comp Endocrinol        ISSN: 0016-6480            Impact factor:   2.822


  71 in total

Review 1.  From fruit flies to barnacles, histamine is the neurotransmitter of arthropod photoreceptors.

Authors:  A E Stuart
Journal:  Neuron       Date:  1999-03       Impact factor: 17.173

2.  Immunohistochemical mapping of histamine, dopamine, and serotonin in the central nervous system of the copepod Calanus finmarchicus (Crustacea; Maxillopoda; Copepoda).

Authors:  Daniel K Hartline; Andrew E Christie
Journal:  Cell Tissue Res       Date:  2010-06-09       Impact factor: 5.249

3.  Amine modulation of Ih in a small neural network.

Authors:  Jack H Peck; Eric Gaier; Erin Stevens; Sarah Repicky; Ronald M Harris-Warrick
Journal:  J Neurophysiol       Date:  2006-08-30       Impact factor: 2.714

4.  Aminergic modulation in lobster stomatogastric ganglion. II. Target neurons of dopamine, octopamine, and serotonin within the pyloric circuit.

Authors:  R E Flamm; R M Harris-Warrick
Journal:  J Neurophysiol       Date:  1986-05       Impact factor: 2.714

5.  Amine modulation of glutamate responses from pyloric motor neurons in lobster stomatogastric ganglion.

Authors:  B R Johnson; R M Harris-Warrick
Journal:  J Neurophysiol       Date:  1997-12       Impact factor: 2.714

6.  Aminergic modulation of graded synaptic transmission in the lobster stomatogastric ganglion.

Authors:  B R Johnson; R M Harris-Warrick
Journal:  J Neurosci       Date:  1990-07       Impact factor: 6.167

7.  Modulation of an integrated central pattern generator-effector system: dopaminergic regulation of cardiac activity in the blue crab Callinectes sapidus.

Authors:  Timothy J Fort; Vladimir Brezina; Mark W Miller
Journal:  J Neurophysiol       Date:  2004-08-04       Impact factor: 2.714

8.  Embryonic development of the histaminergic system in the ventral nerve cord of the Marbled Crayfish (Marmorkrebs).

Authors:  V Rieger; S Harzsch
Journal:  Tissue Cell       Date:  2007-12-11       Impact factor: 2.466

9.  Peptidergic signaling in Calanus finmarchicus (Crustacea, Copepoda): in silico identification of putative peptide hormones and their receptors using a de novo assembled transcriptome.

Authors:  Andrew E Christie; Vittoria Roncalli; Le-Shin Wu; Carrie L Ganote; Thomas Doak; Petra H Lenz
Journal:  Gen Comp Endocrinol       Date:  2013-04-08       Impact factor: 2.822

10.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

View more
  12 in total

1.  Molecular characterization of putative neuropeptide, amine, diffusible gas and small molecule transmitter biosynthetic enzymes in the eyestalk ganglia of the American lobster, Homarus americanus.

Authors:  Andrew E Christie; Meredith E Stanhope; Helen I Gandler; Tess J Lameyer; Micah G Pascual; Devlin N Shea; Andy Yu; Patsy S Dickinson; J Joe Hull
Journal:  Invert Neurosci       Date:  2018-10-01

2.  Diffusible gas transmitter signaling in the copepod crustacean Calanus finmarchicus: identification of the biosynthetic enzymes of nitric oxide (NO), carbon monoxide (CO) and hydrogen sulfide (H2S) using a de novo assembled transcriptome.

Authors:  Andrew E Christie; Tiana M Fontanilla; Vittoria Roncalli; Matthew C Cieslak; Petra H Lenz
Journal:  Gen Comp Endocrinol       Date:  2014-04-18       Impact factor: 2.822

3.  De novo assembly and characterization of central nervous system transcriptome reveals neurotransmitter signaling systems in the rice striped stem borer, Chilo suppressalis.

Authors:  Gang Xu; Shun-Fan Wu; Ya-Su Wu; Gui-Xiang Gu; Qi Fang; Gong-Yin Ye
Journal:  BMC Genomics       Date:  2015-07-15       Impact factor: 3.969

4.  Glutathione S-Transferase (GST) Gene Diversity in the Crustacean Calanus finmarchicus--Contributors to Cellular Detoxification.

Authors:  Vittoria Roncalli; Matthew C Cieslak; Yale Passamaneck; Andrew E Christie; Petra H Lenz
Journal:  PLoS One       Date:  2015-05-06       Impact factor: 3.240

5.  Comprehensive transcriptome study to develop molecular resources of the copepod Calanus sinicus for their potential ecological applications.

Authors:  Qing Yang; Fanyue Sun; Zhi Yang; Hongjun Li
Journal:  Biomed Res Int       Date:  2014-05-20       Impact factor: 3.411

6.  Transcriptional profiling of reproductive development, lipid storage and molting throughout the last juvenile stage of the marine copepod Calanus finmarchicus.

Authors:  Ann M Tarrant; Mark F Baumgartner; Bjørn Henrik Hansen; Dag Altin; Trond Nordtug; Anders J Olsen
Journal:  Front Zool       Date:  2014-12-16       Impact factor: 3.172

7.  Neuropeptidergic Signaling in the American Lobster Homarus americanus: New Insights from High-Throughput Nucleotide Sequencing.

Authors:  Andrew E Christie; Megan Chi; Tess J Lameyer; Micah G Pascual; Devlin N Shea; Meredith E Stanhope; David J Schulz; Patsy S Dickinson
Journal:  PLoS One       Date:  2015-12-30       Impact factor: 3.240

8.  5-hydroxytryptamine synthesized in the aorta-gonad-mesonephros regulates hematopoietic stem and progenitor cell survival.

Authors:  Junhua Lv; Lu Wang; Ya Gao; Yu-Qiang Ding; Feng Liu
Journal:  J Exp Med       Date:  2016-12-28       Impact factor: 14.307

9.  How Tyramine β-Hydroxylase Controls the Production of Octopamine, Modulating the Mobility of Beetles.

Authors:  Li Xu; Hong-Bo Jiang; Xiao-Feng Chen; Ying Xiong; Xue-Ping Lu; Yu-Xia Pei; Guy Smagghe; Jin-Jun Wang
Journal:  Int J Mol Sci       Date:  2018-03-14       Impact factor: 5.923

10.  De novo assembly of a transcriptome for Calanus finmarchicus (Crustacea, Copepoda)--the dominant zooplankter of the North Atlantic Ocean.

Authors:  Petra H Lenz; Vittoria Roncalli; R Patrick Hassett; Le-Shin Wu; Matthew C Cieslak; Daniel K Hartline; Andrew E Christie
Journal:  PLoS One       Date:  2014-02-19       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.