Literature DB >> 24147541

Primary photodynamics of the green/red-absorbing photoswitching regulator of the chromatic adaptation E domain from Fremyella diplosiphon.

Sean M Gottlieb1, Peter W Kim, Nathan C Rockwell, Yuu Hirose, Masahiko Ikeuchi, J Clark Lagarias, Delmar S Larsen.   

Abstract

Phytochromes are red/far-red photosensory proteins that utilize the photoisomerization of a linear tetrapyrrole (bilin) chromophore to detect the red to far-red light ratio. Cyanobacteriochromes (CBCRs) are distantly related cyanobacterial photosensors with homologous bilin-binding GAF domains, but they exhibit greater spectral diversity. Different CBCR subfamilies have been described, with spectral sensitivity varying across the near-ultraviolet and throughout the visible spectrum, but all known CBCRs utilize photoisomerization of the bilin 15,16-double bond as the primary photochemical event. The first CBCR discovered was RcaE, responsible for tuning light harvesting to the incident color environment (complementary chromatic adaptation) in Fremyella diplosiphon. The green/red RcaE photocycle has recently been described in detail. We now extend this analysis by examining femtosecond photodynamics using ultrafast transient absorption techniques with broadband detection and multicomponent global analysis. Excited-state dynamics in both directions are significantly slower than those recently published for the red/green CBCR NpR6012g4. In the forward reaction, the primary Lumi-G photoproduct arises from the longer-lived excited-state populations, leading to a low photoproduct quantum yield. Using dual-excitation wavelength interleaved pump-probe spectroscopy, we observe multiphasic excited-state dynamics in the forward reaction ((15Z)Pg → (15E)Pr), which we interpret as arising from ground-state inhomogeneity with different tautomers of the PCB chromophore. The reverse reaction ((15E)Pr → (15Z)Pg) is characterized via pump-probe spectroscopy and also exhibits slow excited-state decay dynamics and a low photoproduct yield. These results provide the first description of excited-state dynamics for a green/red CBCR.

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Year:  2013        PMID: 24147541     DOI: 10.1021/bi400946q

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  10 in total

1.  The interplay between chromophore and protein determines the extended excited state dynamics in a single-domain phytochrome.

Authors:  Chavdar Slavov; Tobias Fischer; Avishai Barnoy; Heewhan Shin; Aditya G Rao; Christian Wiebeler; Xiaoli Zeng; Yafang Sun; Qianzhao Xu; Alexander Gutt; Kai-Hong Zhao; Wolfgang Gärtner; Xiaojing Yang; Igor Schapiro; Josef Wachtveitl
Journal:  Proc Natl Acad Sci U S A       Date:  2020-06-26       Impact factor: 11.205

2.  Protochromic absorption changes in the two-cysteine photocycle of a blue/orange cyanobacteriochrome.

Authors:  Teppei Sato; Takashi Kikukawa; Risako Miyoshi; Kousuke Kajimoto; Chinatsu Yonekawa; Tomotsumi Fujisawa; Masashi Unno; Toshihiko Eki; Yuu Hirose
Journal:  J Biol Chem       Date:  2019-10-24       Impact factor: 5.157

3.  Protonation Heterogeneity Modulates the Ultrafast Photocycle Initiation Dynamics of Phytochrome Cph1.

Authors:  Julia S Kirpich; L Tyler Mix; Shelley S Martin; Nathan C Rockwell; J Clark Lagarias; Delmar S Larsen
Journal:  J Phys Chem Lett       Date:  2018-06-11       Impact factor: 6.475

Review 4.  The Red Edge: Bilin-Binding Photoreceptors as Optogenetic Tools and Fluorescence Reporters.

Authors:  Kun Tang; Hannes M Beyer; Matias D Zurbriggen; Wolfgang Gärtner
Journal:  Chem Rev       Date:  2021-10-20       Impact factor: 72.087

5.  Revealing the origin of multiphasic dynamic behaviors in cyanobacteriochrome.

Authors:  Dihao Wang; Xiankun Li; Sheng Zhang; Lijuan Wang; Xiaojing Yang; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-05       Impact factor: 11.205

6.  Photoconversion changes bilin chromophore conjugation and protein secondary structure in the violet/orange cyanobacteriochrome NpF2164g3' [corrected].

Authors:  Sunghyuk Lim; Nathan C Rockwell; Shelley S Martin; Jerry L Dallas; J Clark Lagarias; James B Ames
Journal:  Photochem Photobiol Sci       Date:  2014-06       Impact factor: 3.982

7.  Comprehensive analysis of the green-to-blue photoconversion of full-length Cyanobacteriochrome Tlr0924.

Authors:  Samantha J O Hardman; Anna F E Hauck; Ian P Clark; Derren J Heyes; Nigel S Scrutton
Journal:  Biophys J       Date:  2014-11-04       Impact factor: 4.033

8.  Pressurized Liquid Extraction of a Phycocyanobilin Chromophore and Its Reconstitution with a Cyanobacteriochrome Photosensor for Efficient Isotopic Labeling.

Authors:  Takanari Kamo; Toshihiko Eki; Yuu Hirose
Journal:  Plant Cell Physiol       Date:  2021-05-11       Impact factor: 4.927

9.  The photoinitiated reaction pathway of full-length cyanobacteriochrome Tlr0924 monitored over 12 orders of magnitude.

Authors:  Anna F E Hauck; Samantha J O Hardman; Roger J Kutta; Gregory M Greetham; Derren J Heyes; Nigel S Scrutton
Journal:  J Biol Chem       Date:  2014-05-09       Impact factor: 5.157

10.  Heterogeneous photodynamics of the pfr state in the cyanobacterial phytochrome Cph1.

Authors:  Peter W Kim; Nathan C Rockwell; Shelley S Martin; J Clark Lagarias; Delmar S Larsen
Journal:  Biochemistry       Date:  2014-07-08       Impact factor: 3.162

  10 in total

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