Literature DB >> 24146772

Sparse solution of fiber orientation distribution function by diffusion decomposition.

Fang-Cheng Yeh1, Wen-Yih Isaac Tseng.   

Abstract

Fiber orientation is the key information in diffusion tractography. Several deconvolution methods have been proposed to obtain fiber orientations by estimating a fiber orientation distribution function (ODF). However, the L 2 regularization used in deconvolution often leads to false fibers that compromise the specificity of the results. To address this problem, we propose a method called diffusion decomposition, which obtains a sparse solution of fiber ODF by decomposing the diffusion ODF obtained from q-ball imaging (QBI), diffusion spectrum imaging (DSI), or generalized q-sampling imaging (GQI). A simulation study, a phantom study, and an in-vivo study were conducted to examine the performance of diffusion decomposition. The simulation study showed that diffusion decomposition was more accurate than both constrained spherical deconvolution and ball-and-sticks model. The phantom study showed that the angular error of diffusion decomposition was significantly lower than those of constrained spherical deconvolution at 30° crossing and ball-and-sticks model at 60° crossing. The in-vivo study showed that diffusion decomposition can be applied to QBI, DSI, or GQI, and the resolved fiber orientations were consistent regardless of the diffusion sampling schemes and diffusion reconstruction methods. The performance of diffusion decomposition was further demonstrated by resolving crossing fibers on a 30-direction QBI dataset and a 40-direction DSI dataset. In conclusion, diffusion decomposition can improve angular resolution and resolve crossing fibers in datasets with low SNR and substantially reduced number of diffusion encoding directions. These advantages may be valuable for human connectome studies and clinical research.

Entities:  

Mesh:

Year:  2013        PMID: 24146772      PMCID: PMC3795723          DOI: 10.1371/journal.pone.0075747

Source DB:  PubMed          Journal:  PLoS One        ISSN: 1932-6203            Impact factor:   3.240


  27 in total

1.  Characterization and propagation of uncertainty in diffusion-weighted MR imaging.

Authors:  T E J Behrens; M W Woolrich; M Jenkinson; H Johansen-Berg; R G Nunes; S Clare; P M Matthews; J M Brady; S M Smith
Journal:  Magn Reson Med       Date:  2003-11       Impact factor: 4.668

2.  Q-ball imaging.

Authors:  David S Tuch
Journal:  Magn Reson Med       Date:  2004-12       Impact factor: 4.668

3.  Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; David G Gadian; Alan Connelly
Journal:  Neuroimage       Date:  2004-11       Impact factor: 6.556

4.  Mapping complex tissue architecture with diffusion spectrum magnetic resonance imaging.

Authors:  Van J Wedeen; Patric Hagmann; Wen-Yih Isaac Tseng; Timothy G Reese; Robert M Weisskoff
Journal:  Magn Reson Med       Date:  2005-12       Impact factor: 4.668

5.  Robust determination of the fibre orientation distribution in diffusion MRI: non-negativity constrained super-resolved spherical deconvolution.

Authors:  J-Donald Tournier; Fernando Calamante; Alan Connelly
Journal:  Neuroimage       Date:  2007-02-21       Impact factor: 6.556

6.  Maximum entropy spherical deconvolution for diffusion MRI.

Authors:  Daniel C Alexander
Journal:  Inf Process Med Imaging       Date:  2005

7.  Diffusion basis functions decomposition for estimating white matter intravoxel fiber geometry.

Authors:  Alonso Ramirez-Manzanares; Mariano Rivera; Baba C Vemuri; Paul Carney; Thomas Mareci
Journal:  IEEE Trans Med Imaging       Date:  2007-08       Impact factor: 10.048

8.  Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging.

Authors:  Ben Jeurissen; Alexander Leemans; Jacques-Donald Tournier; Derek K Jones; Jan Sijbers
Journal:  Hum Brain Mapp       Date:  2012-05-19       Impact factor: 5.038

9.  The Rician distribution of noisy MRI data.

Authors:  H Gudbjartsson; S Patz
Journal:  Magn Reson Med       Date:  1995-12       Impact factor: 4.668

10.  Detection and modeling of non-Gaussian apparent diffusion coefficient profiles in human brain data.

Authors:  D C Alexander; G J Barker; S R Arridge
Journal:  Magn Reson Med       Date:  2002-08       Impact factor: 4.668

View more
  21 in total

1.  Normal relationship of the cervicomedullary junction with the obex and olivary bodies: a comparison of cadaveric dissection and in vivo diffusion tensor imaging.

Authors:  Erik H Middlebrooks; Kaan Yagmurlu; Jeffrey A Bennett; Sharatchandra Bidari
Journal:  Surg Radiol Anat       Date:  2014-10-16       Impact factor: 1.246

2.  Automatic whole brain tract-based analysis using predefined tracts in a diffusion spectrum imaging template and an accurate registration strategy.

Authors:  Yu-Jen Chen; Yu-Chun Lo; Yung-Chin Hsu; Chun-Chieh Fan; Tzung-Jeng Hwang; Chih-Min Liu; Yi-Ling Chien; Ming H Hsieh; Chen-Chung Liu; Hai-Gwo Hwu; Wen-Yih Isaac Tseng
Journal:  Hum Brain Mapp       Date:  2015-06-05       Impact factor: 5.038

3.  Investigating the tradeoffs between spatial resolution and diffusion sampling for brain mapping with diffusion tractography: time well spent?

Authors:  Evan Calabrese; Alexandra Badea; Christopher L Coe; Gabriele R Lubach; Martin A Styner; G Allan Johnson
Journal:  Hum Brain Mapp       Date:  2014-07-05       Impact factor: 5.038

4.  Global and Targeted Pathway Impact of Gliomas on White Matter Integrity Based on Lobar Localization.

Authors:  David R Ormond; Shawn D'Souza; John A Thompson
Journal:  Cureus       Date:  2017-09-07

5.  7T Multi-shell Hybrid Diffusion Imaging (HYDI) for Mapping Brain Connectivity in Mice.

Authors:  Madelaine Daianu; Neda Jahanshad; Julio E Villalon-Reina; Gautam Prasad; Russell E Jacobs; Samuel Barnes; Berislav V Zlokovic; Axel Montagne; Paul M Thompson
Journal:  Proc SPIE Int Soc Opt Eng       Date:  2015-03-20

6.  Hippocampal Atrophy Is Associated with Altered Hippocampus-Posterior Cingulate Cortex Connectivity in Mesial Temporal Lobe Epilepsy with Hippocampal Sclerosis.

Authors:  Y C Shih; C E Tseng; F-H Lin; H H Liou; W Y I Tseng
Journal:  AJNR Am J Neuroradiol       Date:  2017-01-19       Impact factor: 3.825

7.  Estimating fiber orientation distribution from diffusion MRI with spherical needlets.

Authors:  Hao Yan; Owen Carmichael; Debashis Paul; Jie Peng
Journal:  Med Image Anal       Date:  2018-02-08       Impact factor: 8.545

Review 8.  High-definition fiber tractography for the evaluation of perilesional white matter tracts in high-grade glioma surgery.

Authors:  Kumar Abhinav; Fang-Cheng Yeh; Alireza Mansouri; Gelareh Zadeh; Juan C Fernandez-Miranda
Journal:  Neuro Oncol       Date:  2015-06-27       Impact factor: 12.300

9.  Alterations in the Structural and Functional Connectivity of the Visuomotor Network of Children With Periventricular Leukomalacia.

Authors:  Corinna M Bauer; Christos Papadelis
Journal:  Semin Pediatr Neurol       Date:  2019-05-15       Impact factor: 1.636

10.  Early blindness is associated with increased volume of the uncinate fasciculus.

Authors:  Corinna M Bauer; Zaira Cattaneo; Lotfi B Merabet
Journal:  Eur J Neurosci       Date:  2018-02-16       Impact factor: 3.386

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.