| Literature DB >> 24146536 |
Hani Levkovitch-Verbin1, Shelly Vander, Daria Makarovsky, Fabio Lavinsky.
Abstract
PURPOSE: To investigate age-associated changes in retinal ganglion cell (RGC) response to elevated intraocular pressure (IOP), and to explore the mechanism underlying these changes. Specifically, the effect of aging on inhibitor of apoptosis (IAP) gene family expression was investigated in glaucomatous eyes.Entities:
Mesh:
Substances:
Year: 2013 PMID: 24146536 PMCID: PMC3783363
Source DB: PubMed Journal: Mol Vis ISSN: 1090-0535 Impact factor: 2.367
Primers used for qPCR analysis of gene expression
| F: ATAACCGGGAGATCGTGAG
R: CAGGCTGGAAGGAGAAAGATG | Bcl-2
GeneID:24224 |
| F: TGTGCATCTGGGCCCTG
R: CTGACCGTCCTGTAGTTCTCA | IAP-1
GeneID:78971 |
| F: GTTCCGAGAGCTGAATGAGG
R: TTTTATGGCGGGACGTAGAC | p53
GeneID:24842 |
| F: GGTGAGTCGGATTGCAAG
R: GGCAGTTAGGGATCTCCA | Bcl-xl
GeneID:24888 |
| F: CTCCCAGAAAAGCAAGCA
R: CCTCTGCCAGTTCCACAAC | TNF-α
GeneID:24835 |
| F: GACAAATGTCCCAT
R: CTAATGGACTGCGA | XIAP
GeneID:63897 |
| F: GCTACAGCTTCTCCACCACA R: TCTCCAGGGAGGAAGAGGAT | β-Actin GeneID:81822 |
Figure 1Intraocular pressure in eyes of young and old rats. A and B: All experimental eyes had significantly elevated intraocular pressure (IOP) compared to their control fellow eyes. There was no significant difference in mean or peak IOP between young and old rats. Data presented as SEM, n=8, *=p<0.05.
Figure 2Retinal ganglion cell loss increased with age in both glaucomatous and control fellow eyes. A: The mean retinal ganglion cell (RGC) survival 10 weeks after the induction of elevated intraocular pressure (IOP) is shown. There was a significant decrease in RGCs in the control fellow eyes with age (n=4–8 for each age group, data presented as SEM, p=0.002), as well as in the glaucomatous eyes (n=4–8, p=0.048). B: The amount of glaucomatous RGC loss increased with age (n=4–8, p=0.05). This progression in RGC loss due to age occurred under similar IOP levels. C-H: Representative fluorogold images of RGCs 10 weeks after induction of glaucoma in young and old eyes are shown. Magnification 40X. I: Labeled RGCs were counted with a 40 super wide field objective along two radii in four directions (i.e., superior, temporal, inferior, and nasal) centered on the position of the optic nerve head.
Summary of fold regulation change following glaucoma induction
| Apoptosis, caspase activation inhibitor | −1.31 | Rn.145049 | NM_001107757 | |||
| BCL2-associated agonist of cell death | 1.98 | −1.02 | Rn.36696 | NM_022698 | ||
| B-cell CLL/lymphoma 2 | 1.45 | 1.14 | Rn.9996 | NM_016993 | ||
| B-cell leukemia/lymphoma 2 related protein A1d | 1.75 | 1.30 | Rn.19770 | NM_133416 | ||
| Bcl2-like 1 | −1.12 | Rn.10323 | NM_031535 | |||
| BCL2-like 11
(apoptosis facilitator) | −1.70 | −1.46 | Rn.82709 | NM_022612 | ||
| Harakiri, BCL2 interacting protein | −1.09 | 1.75 | Rn.89639 | NM_057130 | ||
| BCL2-interacting killer (apoptosis-inducing) | 1.38 | 1.08 | Rn.38487 | NM_053704 | ||
| NLR family, apoptosis inhibitory protein 2 | 1.14 | Rn.92423 | XM_226742 | |||
| Baculoviral IAP repeat-containing 3 | −1.58 | Rn.64578 | NM_023987 | |||
| Caspase recruitment domain family, member 6 | 1.67 | −1.25 | Rn.104526 | NM_001106413 | ||
| Caspase 1 | 1.61 | Rn.37508 | NM_012762 | |||
| Caspase 4, apoptosis-related cysteine peptidase | Rn.16195 | NM_053736 | ||||
| Caspase 12 | 1.54 | Rn.81078 | NM_130422 | |||
| Caspase 14 | −1.24 | Rn.198773 | XM_234878 | |||
| Caspase 6 | 1.78 | 1.13 | Rn.88160 | NM_031775 | ||
| Caspase 7 | −1.70 | Rn.53995 | NM_022260 | |||
| Caspase 8 | 1.00 | −1.10 | 1.55 | Rn.54474 | NM_022277 | |
| Caspase 8 associated protein 2 | −1.56 | Rn.198715 | XM_232860 | |||
| Cell death-inducing DFFA-like effector b | −1.71 | −1.00 | Rn.204016 | NM_001108869 | ||
| Death associated protein kinase 1 | −1.46 | Rn.23108 | NM_001107335 | |||
| DNA fragmentation factor, alpha subunit | −1.92 | Rn.6514 | NM_053679 | |||
| DNA fragmentation factor, beta polypeptide (caspase-activated DNase) | Rn.67077 | NM_053362 | ||||
| Fas (TNFRSF6)-associated via death domain | 1.80 | 1.13 | Rn.16183 | NM_152937 | ||
| Fas apoptotic inhibitory molecule | 1.14 | Rn.106419 | NM_080895 | |||
| Interleukin 10 | 1.65 | Rn.9868 | NM_012854 | |||
| LIM homeobox 4 | 1.60 | −1.12 | Rn.48080 | NM_001108348 | ||
| Lymphotoxin alpha (TNF superfamily, member 1) | −1.64 | Rn.160577 | NM_080769 | |||
| Lymphotoxin beta receptor (TNFR superfamily, member3) | 1.69 | Rn.19329 | NM_001008315 | |||
| Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 | 0.73 | Rn.2411 | XM_342346 | |||
| Nucleolar protein 3 (apoptosis repressor with CARD domain) | 1.21 | Rn.86956 | NM_053516 | |||
| Polymerase (DNA directed), beta | 1.41 | −1.23 | Rn.9346 | NM_017141 | ||
| Peroxiredoxin 2 | 1.00 | Rn.2511 | NM_017169 | |||
| Prolactin receptor | 1.50 | 1.06 | Rn.9757 | NM_012630 | ||
| Prokineticin 2 | 1.63 | Rn.211872 | NM_138852 | |||
| PYD and CARD domain containing | 1.69 | Rn.7817 | NM_172322 | |||
| Sphingosine kinase 2 | 1.01 | Rn.41053 | NM_001012066 | |||
| Tumor necrosis factor (TNF superfamily, member 2) | Rn.2275 | NM_012675 | ||||
| Tumor necrosis factor receptor superfamily, member 10b | −1.22 | Rn.105558 | NM_001108873 | |||
| Tumor necrosis factor receptor superfamily, member 11b | −1.44 | Rn.202973 | NM_012870 | |||
| Tumor necrosis factor receptor superfamily, member 1a | −1.59 | Rn.11119 | NM_013091 | |||
| Tumor necrosis factor receptor superfamily, member 1b | −1.01 | Rn.83633 | NM_130426 | |||
| CD40 molecule, TNF receptor superfamily member 5 | 1.31 | 1.69 | Rn.25180 | NM_134360 | ||
| Fas (TNF receptor superfamily, member 6) | 1.20 | −1.16 | Rn.162521 | NM_139194 | ||
| Tumor necrosis factor (ligand) superfamily, member 10 | 1.84 | Rn.83627 | NM_145681 | |||
| Tumor protein p53 | −1.13 | −1.29 | Rn.54443 | NM_030989 | ||
| TNFRSF1A-associated via death domain | 1.58 | 1.45 | Rn.18545 | NM_001100480 | ||
| Similar to Tnf receptor-associated factor 1 | −1.27 | Rn.136874 | XM_001080233 | |||
| Tnf receptor-associated factor 3 | 1.22 | −1.09 | Rn.12033 | NM_001108724 | ||
| Tnf receptor associated factor 4 | −1.26 | Rn.3219 | NM_001107017 | |||
| Tumor protein p53 binding protein, 2 | 1.07 | Rn.50333 | XM_223012 | |||
| Tumor protein p63 | Rn.42907 | NM_019221 | ||||
| Tumor protein p73 | 1.17 | Rn.103860 | NM_001108696 |
Figure 3Effect of aging on selected proapoptotic and prosurvival genes. Real-time PCR analysis of selected genes was performed in young (3 months) and old (15 months) rats. The following genes are presented: Inhibitor of apoptosis (IAP)-1 gene (A), X-linked IAP (XIAP) gene (B); p53 gene (C), Bcl-2 gene (D), Bcl-xl gene (E), tumor necrosis factor (TNF)-α gene (F). Interestingly, IAP-1 and XIAP expression was significantly downregulated in the glaucomatous eyes of old rats, but upregulated in young rats. Data represent mean ± standard error of the mean (SEM); n=8; *p<0.05.
Figure 4Immunohistochemistry for inhibitor of apoptosis 1, the retinal ganglion cell marker Thy 1, glial fibrillary acidic protein, and 4',6-diamidino-2-phenylindole in retinal cryosections of young and old rats at 8 days after induction of elevated intraocular pressure (IOP). The merged image shows colocalization of IAP with Thy 1 (yellow) and with glial fibrillary acidic protein (GFAP; purple), suggesting that the source for changes in IAP expression is from retinal ganglion cells (RGCs) and glial cells. A: In 3-months-old rats, IAP levels increased in glaucomatous eyes as well as staining for GFAP. B: IAP-1 staining decreased in old glaucomatous 13-month-old eyes as compared to fellow eyes. Magnification 40X, scale bars: all panels 20 μm.
Figure 5Immunohistochemistry for X-linked inhibitor of apoptosis, Thy 1, glial fibrillary acidic protein, and 4',6-diamidino-2-phenylindole in retinal cryosections of young and old eyes at 8 days after induction of glaucoma. The merged image shows colocalization of X-linked inhibitor of apoptosis (XIAP) with Thy 1 (yellow), suggesting that the source for changes in XIAP expression is in the retinal ganglion cell (RGC) layer. A: In 3-month-old eyes, XIAP levels were increased as compared to fellow eyes. B: In old glaucomatous 13-month-old eyes, XIAP staining decreased in the RGC layer as compared to fellow eyes. Magnification 40X, scale bars: all panels 20 μm.