Literature DB >> 24146432

Hydrophobic substitution of surface residues affects lipase stability in organic solvents.

Maryam Monsef Shokri1, Shahin Ahmadian, Neda Akbari, Khosro Khajeh.   

Abstract

A novel lipase has been recently isolated from a local Pseudomonas sp. (GQ243724). In the present study, we have tried to increase the organic solvent stability of this lipase using site-directed mutagenesis. Eight variants N219L, N219I, N219P, N219A, N219R, N219D, S251L, and S251K were designed to change the surface hydrophobicity of this enzyme with respect to the wild-type. Among these variants, the stability of N219L and N219I significantly increased in the presence of all tested organic solvents, whereas two mutants (N219R and N219D) significantly exhibited decreased stabilities in all the organic solvent studied, suggesting that improvement of hydrophobic patches on the enzyme surface enhances the stability in organic media. Furthermore, replacing Ser²⁵¹ with hydrophobic residues on the enzyme surface dramatically diminished its stability in the tested condition. In spite of the distance of the mutated sites from the active site, the values of k(cat) and K(m) were affected. Finally, structural analysis of the wild-type and mutated variants was carried out in the presence and absence of some organic solvents using circular dichroism and fluorescence spectroscopy.

Entities:  

Mesh:

Substances:

Year:  2014        PMID: 24146432     DOI: 10.1007/s12033-013-9716-y

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  32 in total

1.  Properties of a thermostable and solvent stable extracellular lipase from a Pseudomonas sp. AG-8.

Authors:  A K Sharma; R P Tiwari; G S Hoondal
Journal:  J Basic Microbiol       Date:  2001       Impact factor: 2.281

2.  Stabilities and conformational transitions of various proteases in the presence of an organic solvent.

Authors:  Hiroyasu Ogino; Yuichi Gemba; Yoshikazu Yutori; Noriyuki Doukyu; Kosaku Ishimi; Haruo Ishikawa
Journal:  Biotechnol Prog       Date:  2007 Jan-Feb

3.  Effect of exchange of amino acid residues of the surface region of the PST-01 protease on its organic solvent-stability.

Authors:  Hiroyasu Ogino; Takeshi Uchiho; Noriyuki Doukyu; Masahiro Yasuda; Kosaku Ishimi; Haruo Ishikawa
Journal:  Biochem Biophys Res Commun       Date:  2007-05-15       Impact factor: 3.575

4.  Modification of a PCR-based site-directed mutagenesis method.

Authors:  C L Fisher; G K Pei
Journal:  Biotechniques       Date:  1997-10       Impact factor: 1.993

5.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

6.  Crystal structure of pseudomonas aeruginosa lipase in the open conformation. The prototype for family I.1 of bacterial lipases.

Authors:  M Nardini; D A Lang; K Liebeton; K E Jaeger; B W Dijkstra
Journal:  J Biol Chem       Date:  2000-10-06       Impact factor: 5.157

7.  Purification and characterization of organic solvent-stable lipase from organic solvent-tolerant Pseudomonas aeruginosa LST-03.

Authors:  H Ogino; S Nakagawa; K Shinya; T Muto; N Fujimura; M Yasuda; H Ishikawa
Journal:  J Biosci Bioeng       Date:  2000       Impact factor: 2.894

8.  Solvent-stable Pseudomonas aeruginosa PseA protease gene: identification, molecular characterization, phylogenetic and bioinformatic analysis to study reasons for solvent stability.

Authors:  Anshu Gupta; Swatismita Ray; Sanjay Kapoor; S K Khare
Journal:  J Mol Microbiol Biotechnol       Date:  2007-08-21

9.  Engineering the loops in a lipase for stability in DMSO.

Authors:  Poornima Yedavalli; Nalam Madhusudhana Rao
Journal:  Protein Eng Des Sel       Date:  2013-02-11       Impact factor: 1.650

10.  High-resolution structural and thermodynamic analysis of extreme stabilization of human procarboxypeptidase by computational protein design.

Authors:  Gautam Dantas; Colin Corrent; Steve L Reichow; James J Havranek; Ziad M Eletr; Nancy G Isern; Brian Kuhlman; Gabriele Varani; Ethan A Merritt; David Baker
Journal:  J Mol Biol       Date:  2006-12-02       Impact factor: 5.469

View more
  6 in total

Review 1.  Recombinant Lipases and Phospholipases and Their Use as Biocatalysts for Industrial Applications.

Authors:  Grazia M Borrelli; Daniela Trono
Journal:  Int J Mol Sci       Date:  2015-09-01       Impact factor: 5.923

2.  Adsorption/desorption and bioavailability of methamphetamine in simulated gastrointestinal fluids under the presence of multiwalled carbon nanotubes.

Authors:  Jing Zhang; Zhenhu Xiong; Lei Wang; Kai Zhang
Journal:  Environ Sci Pollut Res Int       Date:  2015-01-13       Impact factor: 4.223

3.  Filling the Void: Introducing Aromatic Interactions into Solvent Tunnels To Enhance Lipase Stability in Methanol.

Authors:  Shalev Gihaz; Margarita Kanteev; Yael Pazy; Ayelet Fishman
Journal:  Appl Environ Microbiol       Date:  2018-11-15       Impact factor: 4.792

4.  Sortase A-mediated crosslinked short-chain dehydrogenases/reductases as novel biocatalysts with improved thermostability and catalytic efficiency.

Authors:  Kunpeng Li; Rongzhen Zhang; Yan Xu; Zhimeng Wu; Jing Li; Xiaotian Zhou; Jiawei Jiang; Haiyan Liu; Rong Xiao
Journal:  Sci Rep       Date:  2017-06-08       Impact factor: 4.379

Review 5.  From Protein Features to Sensing Surfaces.

Authors:  Greta Faccio
Journal:  Sensors (Basel)       Date:  2018-04-15       Impact factor: 3.576

6.  Ion-Pair Interaction and Hydrogen Bonds as Main Features of Protein Thermostability in Mutated T1 Recombinant Lipase Originating from Geobacillus zalihae.

Authors:  Siti Nor Hasmah Ishak; Nor Hafizah Ahmad Kamarudin; Mohd Shukuri Mohamad Ali; Adam Thean Chor Leow; Raja Noor Zaliha Raja Abd Rahman
Journal:  Molecules       Date:  2020-07-28       Impact factor: 4.411

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.