Literature DB >> 24145415

High-throughput imaging of neuronal activity in Caenorhabditis elegans.

Johannes Larsch1, Donovan Ventimiglia, Cornelia I Bargmann, Dirk R Albrecht.   

Abstract

Neuronal responses to sensory inputs can vary based on genotype, development, experience, or stochastic factors. Existing neuronal recording techniques examine a single animal at a time, limiting understanding of the variability and range of potential responses. To scale up neuronal recordings, we here describe a system for simultaneous wide-field imaging of neuronal calcium activity from at least 20 Caenorhabditis elegans animals under precise microfluidic chemical stimulation. This increased experimental throughput was used to perform a systematic characterization of chemosensory neuron responses to multiple odors, odor concentrations, and temporal patterns, as well as responses to pharmacological manipulation. The system allowed recordings from sensory neurons and interneurons in freely moving animals, whose neuronal responses could be correlated with behavior. Wide-field imaging provides a tool for comprehensive circuit analysis with elevated throughput in C. elegans.

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Year:  2013        PMID: 24145415      PMCID: PMC3831453          DOI: 10.1073/pnas.1318325110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  33 in total

Review 1.  Different data from different labs: lessons from studies of gene-environment interaction.

Authors:  Douglas Wahlsten; Pamela Metten; Tamara J Phillips; Stephen L Boehm; Sue Burkhart-Kasch; Janet Dorow; Sharon Doerksen; Chris Downing; Jennifer Fogarty; Kristina Rodd-Henricks; René Hen; Carrie S McKinnon; Catherine M Merrill; Cedar Nolte; Melike Schalomon; Jason P Schlumbohm; Jason R Sibert; Charlotte D Wenger; Bruce C Dudek; John C Crabbe
Journal:  J Neurobiol       Date:  2003-01

2.  The autofluorescent "lipofuscin granules" in the intestinal cells of Caenorhabditis elegans are secondary lysosomes.

Authors:  G V Clokey; L A Jacobson
Journal:  Mech Ageing Dev       Date:  1986-06       Impact factor: 5.432

3.  The neural circuit for touch sensitivity in Caenorhabditis elegans.

Authors:  M Chalfie; J E Sulston; J G White; E Southgate; J N Thomson; S Brenner
Journal:  J Neurosci       Date:  1985-04       Impact factor: 6.167

4.  The fundamental role of pirouettes in Caenorhabditis elegans chemotaxis.

Authors:  J T Pierce-Shimomura; T M Morse; S R Lockery
Journal:  J Neurosci       Date:  1999-11-01       Impact factor: 6.167

5.  Odorant-selective genes and neurons mediate olfaction in C. elegans.

Authors:  C I Bargmann; E Hartwieg; H R Horvitz
Journal:  Cell       Date:  1993-08-13       Impact factor: 41.582

6.  Dynamics of the hippocampal ensemble code for space.

Authors:  M A Wilson; B L McNaughton
Journal:  Science       Date:  1993-08-20       Impact factor: 47.728

7.  Levamisole-resistant mutants of the nematode Caenorhabditis elegans appear to lack pharmacological acetylcholine receptors.

Authors:  J A Lewis; C H Wu; J H Levine; H Berg
Journal:  Neuroscience       Date:  1980       Impact factor: 3.590

8.  In vivo imaging of C. elegans ASH neurons: cellular response and adaptation to chemical repellents.

Authors:  Massimo A Hilliard; Alfonso J Apicella; Rex Kerr; Hiroshi Suzuki; Paolo Bazzicalupo; William R Schafer
Journal:  EMBO J       Date:  2004-12-02       Impact factor: 11.598

9.  odr-10 encodes a seven transmembrane domain olfactory receptor required for responses to the odorant diacetyl.

Authors:  P Sengupta; J H Chou; C I Bargmann
Journal:  Cell       Date:  1996-03-22       Impact factor: 41.582

10.  The genetics of Caenorhabditis elegans.

Authors:  S Brenner
Journal:  Genetics       Date:  1974-05       Impact factor: 4.562

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  78 in total

1.  Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.

Authors:  Jeffrey P Nguyen; Frederick B Shipley; Ashley N Linder; George S Plummer; Mochi Liu; Sagar U Setru; Joshua W Shaevitz; Andrew M Leifer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

2.  Rich-Club Organization in Effective Connectivity among Cortical Neurons.

Authors:  Sunny Nigam; Masanori Shimono; Shinya Ito; Fang-Chin Yeh; Nicholas Timme; Maxym Myroshnychenko; Christopher C Lapish; Zachary Tosi; Pawel Hottowy; Wesley C Smith; Sotiris C Masmanidis; Alan M Litke; Olaf Sporns; John M Beggs
Journal:  J Neurosci       Date:  2016-01-20       Impact factor: 6.167

3.  Neural and behavioral control in Caenorhabditis elegans by a yellow-light-activatable caged compound.

Authors:  Hironori Takahashi; Mako Kamiya; Minoru Kawatani; Keitaro Umezawa; Yoshiaki Ukita; Shinsuke Niwa; Toshiyuki Oda; Yasuteru Urano
Journal:  Proc Natl Acad Sci U S A       Date:  2021-02-09       Impact factor: 11.205

4.  An automated microfluidic system for screening Caenorhabditis elegans behaviors using electrotaxis.

Authors:  Dingsheng Liu; Bhagwati Gupta; Ponnambalam Ravi Selvaganapathy
Journal:  Biomicrofluidics       Date:  2016-02-11       Impact factor: 2.800

5.  Sex, age, and hunger regulate behavioral prioritization through dynamic modulation of chemoreceptor expression.

Authors:  Deborah A Ryan; Renee M Miller; KyungHwa Lee; Scott J Neal; Kelli A Fagan; Piali Sengupta; Douglas S Portman
Journal:  Curr Biol       Date:  2014-10-16       Impact factor: 10.834

Review 6.  Large-scale imaging in small brains.

Authors:  Misha B Ahrens; Florian Engert
Journal:  Curr Opin Neurobiol       Date:  2015-01-28       Impact factor: 6.627

7.  A microfluidic platform for lifelong high-resolution and high throughput imaging of subtle aging phenotypes in C. elegans.

Authors:  Sahand Saberi-Bosari; Javier Huayta; Adriana San-Miguel
Journal:  Lab Chip       Date:  2018-10-09       Impact factor: 6.799

8.  Hierarchical sparse coding in the sensory system of Caenorhabditis elegans.

Authors:  Alon Zaslaver; Idan Liani; Oshrat Shtangel; Shira Ginzburg; Lisa Yee; Paul W Sternberg
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-12       Impact factor: 11.205

9.  A quantitative model of conserved macroscopic dynamics predicts future motor commands.

Authors:  Connor Brennan; Alexander Proekt
Journal:  Elife       Date:  2019-07-11       Impact factor: 8.140

10.  Chemosensory signal transduction in Caenorhabditis elegans.

Authors:  Denise M Ferkey; Piali Sengupta; Noelle D L'Etoile
Journal:  Genetics       Date:  2021-03-31       Impact factor: 4.562

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