Literature DB >> 2414154

The nucleotide sequence of the gene coding for the 16S rRNA from the archaebacterium Halobacterium halobium.

A S Mankin, V K Kagramanova, N L Teterina, P M Rubtsov, E N Belova, A M Kopylov, L A Baratova, A A Bogdanov.   

Abstract

The complete 1473-bp sequence of the 16S rRNA gene from the archaebacterium Halobacterium halobium has been determined. Alignment with the sequences of the 16S rRNA gene from the archaebacteria Halobacterium volcanii and Halococcus morrhua reveals similar degrees of homology, about 88%. Differences in the primary structures of H. halobium and eubacterial (Escherichia coli) 16S rRNA or eukaryotic (Dictyostelium discoideum) 18S rRNA are much higher, corresponding to 63% and 56% homology, respectively. A comparison of the nucleotide sequence of the H. halobium 16S rRNA with those of its archaebacterial counterparts generally confirms a secondary structure model of the RNA contained in the small subunit of the archaebacterial ribosome.

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Year:  1985        PMID: 2414154     DOI: 10.1016/0378-1119(85)90271-9

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  14 in total

Review 1.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; P De Rijk; A Goris; R De Wachter
Journal:  Nucleic Acids Res       Date:  1991-04-25       Impact factor: 16.971

2.  Compilation of small ribosomal subunit RNA sequences.

Authors:  J M Neefs; Y Van de Peer; L Hendriks; R De Wachter
Journal:  Nucleic Acids Res       Date:  1990-04-25       Impact factor: 16.971

Review 3.  Nucleolytic processing of ribonucleic acid transcripts in procaryotes.

Authors:  T C King; R Sirdeskmukh; D Schlessinger
Journal:  Microbiol Rev       Date:  1986-12

4.  Comparative genomic analysis of the Haloferax volcanii DS2 and Halobacterium salinarium GRB contig maps reveals extensive rearrangement.

Authors:  A St Jean; R L Charlebois
Journal:  J Bacteriol       Date:  1996-07       Impact factor: 3.490

5.  Compilation of small ribosomal subunit RNA sequences.

Authors:  E Huysmans; R De Wachter
Journal:  Nucleic Acids Res       Date:  1986       Impact factor: 16.971

Review 6.  Methanogens and the diversity of archaebacteria.

Authors:  W J Jones; D P Nagle; W B Whitman
Journal:  Microbiol Rev       Date:  1987-03

7.  Compilation of small ribosomal subunit RNA sequences.

Authors:  E Dams; L Hendriks; Y Van de Peer; J M Neefs; G Smits; I Vandenbempt; R De Wachter
Journal:  Nucleic Acids Res       Date:  1988       Impact factor: 16.971

8.  Partial sequence of the gene for a serine protease from a halophilic archaeum Haloferax mediterranei R4, and nucleotide sequences of 16S rRNA encoding genes from several halophilic archaea.

Authors:  M Kamekura; Y Seno
Journal:  Experientia       Date:  1993-07-05

9.  Degradative capacities and 16S rRNA-targeted whole-cell hybridization of sulfate-reducing bacteria in an anaerobic enrichment culture utilizing alkylbenzenes from crude oil.

Authors:  R Rabus; M Fukui; H Wilkes; F Widdle
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

10.  Phylogenetic analyses of some extremely halophilic archaea isolated from Dead Sea water, determined on the basis of their 16S rRNA sequences.

Authors:  D R Arahal; F E Dewhirst; B J Paster; B E Volcani; A Ventosa
Journal:  Appl Environ Microbiol       Date:  1996-10       Impact factor: 4.792

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