Literature DB >> 24132510

Influence of bacteria on epigenetic gene control.

Kyoko Takahashi1.   

Abstract

Cellular information is inherited by daughter cells through epigenetic routes in addition to genetic routes. Epigenetics, which is primarily mediated by inheritable DNA methylation and histone post-translational modifications, involves changes in the chromatin structure important for regulating gene expression. It is widely known that epigenetic control of gene expression plays an essential role in cell differentiation processes in vertebrates. Furthermore, because epigenetic changes can occur reversibly depending on environmental factors in differentiated cells, they have recently attracted considerable attention as targets for disease prevention and treatment. These environmental factors include diet, exposure to bacteria or viruses, and air pollution, of which this review focuses on the influence of bacteria on epigenetic gene control in a host. Host-bacterial interactions not only occur upon pathogenic bacterial infection but also continuously exist between commensal bacteria and the host. These bacterial stimuli play an essential role in various biological responses involving external stimuli and in maintaining physiological homeostasis by altering epigenetic markers and machinery.

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Year:  2013        PMID: 24132510     DOI: 10.1007/s00018-013-1487-x

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  72 in total

1.  Activation of DNA methyltransferase 1 by EBV LMP1 Involves c-Jun NH(2)-terminal kinase signaling.

Authors:  Chia-Lung Tsai; Hsin-Pai Li; Yen-Jung Lu; Chuen Hsueh; Ying Liang; Chi-Long Chen; Sai Wah Tsao; Ka-Po Tse; Jau-Song Yu; Yu-Sun Chang
Journal:  Cancer Res       Date:  2006-12-15       Impact factor: 12.701

2.  Sodium butyrate improves locomotor impairment and early mortality in a rotenone-induced Drosophila model of Parkinson's disease.

Authors:  R St Laurent; L M O'Brien; S T Ahmad
Journal:  Neuroscience       Date:  2013-04-25       Impact factor: 3.590

3.  Infection of lymphoid cells by integration-defective human immunodeficiency virus type 1 increases de novo methylation.

Authors:  J Y Fang; J A Mikovits; R Bagni; C L Petrow-Sadowski; F W Ruscetti
Journal:  J Virol       Date:  2001-10       Impact factor: 5.103

4.  Epigenetic control of the host gene by commensal bacteria in large intestinal epithelial cells.

Authors:  Kyoko Takahashi; Yutaka Sugi; Kou Nakano; Masato Tsuda; Kenta Kurihara; Akira Hosono; Shuichi Kaminogawa
Journal:  J Biol Chem       Date:  2011-08-23       Impact factor: 5.157

5.  Post-weaning diet affects genomic imprinting at the insulin-like growth factor 2 (Igf2) locus.

Authors:  Robert A Waterland; Juan-Ru Lin; Charlotte A Smith; Randy L Jirtle
Journal:  Hum Mol Genet       Date:  2006-01-18       Impact factor: 6.150

6.  Reactivation of latent HIV-1 by a wide variety of butyric acid-producing bacteria.

Authors:  Kenichi Imai; Kiyoshi Yamada; Muneaki Tamura; Kuniyasu Ochiai; Takashi Okamoto
Journal:  Cell Mol Life Sci       Date:  2012-02-10       Impact factor: 9.261

Review 7.  When bacteria target the nucleus: the emerging family of nucleomodulins.

Authors:  Hélène Bierne; Pascale Cossart
Journal:  Cell Microbiol       Date:  2012-02-23       Impact factor: 3.715

8.  Helicobacter pylori-induced histone modification, associated gene expression in gastric epithelial cells, and its implication in pathogenesis.

Authors:  Song-Ze Ding; Wolfgang Fischer; Maria Kaparakis-Liaskos; George Liechti; D Scott Merrell; Patrick A Grant; Richard L Ferrero; Sheila E Crowe; Rainer Haas; Masanori Hatakeyama; Joanna B Goldberg
Journal:  PLoS One       Date:  2010-04-01       Impact factor: 3.240

9.  Histone H3 phosphorylation by IKK-alpha is critical for cytokine-induced gene expression.

Authors:  Yumi Yamamoto; Udit N Verma; Shashi Prajapati; Youn-Tae Kwak; Richard B Gaynor
Journal:  Nature       Date:  2003-06-05       Impact factor: 49.962

10.  Human polyomavirus BKV transcriptionally activates DNA methyltransferase 1 through the pRb/E2F pathway.

Authors:  M T McCabe; J A Low; M J Imperiale; M L Day
Journal:  Oncogene       Date:  2006-05-04       Impact factor: 9.867

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  27 in total

Review 1.  Influences of the Gut Microbiota on DNA Methylation and Histone Modification.

Authors:  Jianzhong Ye; Wenrui Wu; Yating Li; Lanjuan Li
Journal:  Dig Dis Sci       Date:  2017-03-24       Impact factor: 3.199

2.  NR3C1 methylation as a moderator of the effects of maternal support and stress on insecure attachment development.

Authors:  Guy Bosmans; Jami F Young; Benjamin L Hankin
Journal:  Dev Psychol       Date:  2017-10-23

Review 3.  Microbial transmission from mothers with obesity or diabetes to infants: an innovative opportunity to interrupt a vicious cycle.

Authors:  Taylor K Soderborg; Sarah J Borengasser; Linda A Barbour; Jacob E Friedman
Journal:  Diabetologia       Date:  2016-02-02       Impact factor: 10.122

Review 4.  The Role of Host Cell DNA Methylation in the Immune Response to Bacterial Infection.

Authors:  Wanhai Qin; Brendon P Scicluna; Tom van der Poll
Journal:  Front Immunol       Date:  2021-07-29       Impact factor: 7.561

5.  Postnatal epigenetic regulation of intestinal stem cells requires DNA methylation and is guided by the microbiome.

Authors:  Da-Hai Yu; Manasi Gadkari; Quan Zhou; Shiyan Yu; Nan Gao; Yongtao Guan; Deborah Schady; Tony N Roshan; Miao-Hsueh Chen; Eleonora Laritsky; Zhongqi Ge; Hui Wang; Rui Chen; Caroline Westwater; Lynn Bry; Robert A Waterland; Chelsea Moriarty; Cindy Hwang; Alton G Swennes; Sean R Moore; Lanlan Shen
Journal:  Genome Biol       Date:  2015-09-30       Impact factor: 13.583

Review 6.  Influences of diet and the gut microbiome on epigenetic modulation in cancer and other diseases.

Authors:  Bidisha Paul; Stephen Barnes; Wendy Demark-Wahnefried; Casey Morrow; Carolina Salvador; Christine Skibola; Trygve O Tollefsbol
Journal:  Clin Epigenetics       Date:  2015-10-16       Impact factor: 6.551

7.  Vibrio vulnificus VvpE inhibits mucin 2 expression by hypermethylation via lipid raft-mediated ROS signaling in intestinal epithelial cells.

Authors:  S-J Lee; Y H Jung; S Y Oh; K K Jang; H S Lee; S H Choi; H J Han
Journal:  Cell Death Dis       Date:  2015-06-18       Impact factor: 8.469

Review 8.  Epigenetic control of mobile DNA as an interface between experience and genome change.

Authors:  James A Shapiro
Journal:  Front Genet       Date:  2014-04-25       Impact factor: 4.599

Review 9.  Microbiota and Neurological Disorders: A Gut Feeling.

Authors:  Walter H Moos; Douglas V Faller; David N Harpp; Iphigenia Kanara; Julie Pernokas; Whitney R Powers; Kosta Steliou
Journal:  Biores Open Access       Date:  2016-05-01

10.  Environmental disruption of host-microbe co-adaptation as a potential driving force in evolution.

Authors:  Yoav Soen
Journal:  Front Genet       Date:  2014-06-20       Impact factor: 4.599

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