Literature DB >> 24131284

Development and characterization of 14 microsatellite loci in the Neotropical fish Geophagus brasiliensis (Perciformes, Cichlidae).

D G Ferreira1, B A Galindo, A N Alves, F S Almeida, C F Ruas, S H Sofia.   

Abstract

Fourteen polymorphic microsatellite loci were isolated and characterized for the Neotropical cichlid Geophagus brasiliensis and tested on 30 individuals belonging to a single population. Among the 14 loci described, four showed potential presence of null alleles, inferred from the excess of homozygous genotypes, and three of these loci showed significant deviations from Hardy-Weinberg equilibrium. Fifty-nine different alleles were detected (ranging from two to eight alleles per locus), with estimates of observed and expected heterozygosity ranging from 0·167 to 0·700 and from 0·269 to 0·825. Cross-amplification of primers was successful in five other cichlid species.
© 2013 The Fisheries Society of the British Isles.

Entities:  

Keywords:  Geophagini; SSR; genetic marker; genomic library

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Substances:

Year:  2013        PMID: 24131284     DOI: 10.1111/jfb.12227

Source DB:  PubMed          Journal:  J Fish Biol        ISSN: 0022-1112            Impact factor:   2.051


  2 in total

1.  Cross-species Exon Capture and Whole Exome Sequencing: Application, Utility and Challenges for Genomic Resource Development in Non-model Species.

Authors:  T Jackson; E Ishengoma; C Rhode
Journal:  Mar Biotechnol (NY)       Date:  2021-07-09       Impact factor: 3.619

2.  Genetic Diversity of the Endangered Neotropical Cichlid Fish (Gymnogeophagus setequedas) in Brazil.

Authors:  Lenice Souza-Shibatta; Thais Kotelok-Diniz; Dhiego G Ferreira; Oscar A Shibatta; Silvia H Sofia; Lucileine de Assumpção; Suelen F R Pini; Sergio Makrakis; Maristela C Makrakis
Journal:  Front Genet       Date:  2018-02-02       Impact factor: 4.599

  2 in total

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