Literature DB >> 24127573

DNA-uptake machinery of naturally competent Vibrio cholerae.

Patrick Seitz1, Melanie Blokesch.   

Abstract

Natural competence for transformation is a mode of horizontal gene transfer that is commonly used by bacteria to take up DNA from their environment. As part of this developmental program, so-called competence genes, which encode the components of a DNA-uptake machinery, are expressed. Several models have been proposed for the DNA-uptake complexes of competent bacteria, and most include a type IV (pseudo)pilus as a core component. However, cell-biology-based approaches to visualizing competence proteins have so far been restricted to Gram-positive bacteria. Here, we report the visualization of a competence-induced pilus in the Gram-negative bacterium Vibrio cholerae. We show that piliated cells mostly contain a single pilus that is not biased toward a polar localization and that this pilus colocalizes with the outer membrane secretin PilQ. PilQ, on the other hand, forms several foci around the cell and occasionally colocalizes with the dynamic cytoplasmic-traffic ATPase PilB, which is required for pilus extension. We also determined the minimum competence regulon of V. cholerae, which includes at least 19 genes. Bacteria with mutations in those genes were characterized with respect to the presence of surface-exposed pili, DNA uptake, and natural transformability. Based on these phenotypes, we propose that DNA uptake in naturally competent V. cholerae cells occurs in at least two steps: a pilus-dependent translocation of the incoming DNA across the outer membrane and a pilus-independent shuttling of the DNA through the periplasm and into the cytoplasm.

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Year:  2013        PMID: 24127573      PMCID: PMC3816411          DOI: 10.1073/pnas.1315647110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  45 in total

1.  Minor pseudopilin self-assembly primes type II secretion pseudopilus elongation.

Authors:  David A Cisneros; Peter J Bond; Anthony P Pugsley; Manuel Campos; Olivera Francetic
Journal:  EMBO J       Date:  2011-12-09       Impact factor: 11.598

Review 2.  Membrane-associated DNA transport machines.

Authors:  Briana Burton; David Dubnau
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-23       Impact factor: 10.005

Review 3.  Type IV pili: e pluribus unum?

Authors:  Vladimir Pelicic
Journal:  Mol Microbiol       Date:  2008-04-08       Impact factor: 3.501

4.  The three-layered DNA uptake machinery at the cell pole in competent Bacillus subtilis cells is a stable complex.

Authors:  Miriam Kaufenstein; Martin van der Laan; Peter L Graumann
Journal:  J Bacteriol       Date:  2011-01-28       Impact factor: 3.490

Review 5.  Cues and regulatory pathways involved in natural competence and transformation in pathogenic and environmental Gram-negative bacteria.

Authors:  Patrick Seitz; Melanie Blokesch
Journal:  FEMS Microbiol Rev       Date:  2012-09-20       Impact factor: 16.408

Review 6.  Induction of competence regulons as a general response to stress in gram-positive bacteria.

Authors:  Jean-Pierre Claverys; Marc Prudhomme; Bernard Martin
Journal:  Annu Rev Microbiol       Date:  2006       Impact factor: 15.500

7.  Chitin induces natural competence in Vibrio cholerae.

Authors:  Karin L Meibom; Melanie Blokesch; Nadia A Dolganov; Cheng-Yen Wu; Gary K Schoolnik
Journal:  Science       Date:  2005-12-16       Impact factor: 47.728

8.  A key presynaptic role in transformation for a widespread bacterial protein: DprA conveys incoming ssDNA to RecA.

Authors:  Isabelle Mortier-Barrière; Marion Velten; Pauline Dupaigne; Nicolas Mirouze; Olivier Piétrement; Stephen McGovern; Gwennaele Fichant; Bernard Martin; Philippe Noirot; Eric Le Cam; Patrice Polard; Jean-Pierre Claverys
Journal:  Cell       Date:  2007-09-07       Impact factor: 41.582

9.  comF, a Bacillus subtilis late competence locus, encodes a protein similar to ATP-dependent RNA/DNA helicases.

Authors:  J A Londoño-Vallejo; D Dubnau
Journal:  Mol Microbiol       Date:  1993-07       Impact factor: 3.501

10.  The regulatory network of natural competence and transformation of Vibrio cholerae.

Authors:  Mirella Lo Scrudato; Melanie Blokesch
Journal:  PLoS Genet       Date:  2012-06-21       Impact factor: 5.917

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  71 in total

1.  Bacterial physiology: vibrio uptake apparatus.

Authors:  Sheilagh Molloy
Journal:  Nat Rev Microbiol       Date:  2013-11-11       Impact factor: 60.633

2.  Kinetics of DNA uptake during transformation provide evidence for a translocation ratchet mechanism.

Authors:  Christof Hepp; Berenike Maier
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-17       Impact factor: 11.205

3.  Homologues of Genetic Transformation DNA Import Genes Are Required for Rhodobacter capsulatus Gene Transfer Agent Recipient Capability Regulated by the Response Regulator CtrA.

Authors:  Cedric A Brimacombe; Hao Ding; Jeanette A Johnson; J Thomas Beatty
Journal:  J Bacteriol       Date:  2015-06-01       Impact factor: 3.490

4.  Zinc and ATP binding of the hexameric AAA-ATPase PilF from Thermus thermophilus: role in complex stability, piliation, adhesion, twitching motility, and natural transformation.

Authors:  Ralf Salzer; Martin Herzberg; Dietrich H Nies; Friederike Joos; Barbara Rathmann; Yvonne Thielmann; Beate Averhoff
Journal:  J Biol Chem       Date:  2014-09-08       Impact factor: 5.157

Review 5.  Bacterial transformation: distribution, shared mechanisms and divergent control.

Authors:  Calum Johnston; Bernard Martin; Gwennaele Fichant; Patrice Polard; Jean-Pierre Claverys
Journal:  Nat Rev Microbiol       Date:  2014-02-10       Impact factor: 60.633

6.  Systematic genetic dissection of chitin degradation and uptake in Vibrio cholerae.

Authors:  Chelsea A Hayes; Triana N Dalia; Ankur B Dalia
Journal:  Environ Microbiol       Date:  2017-08-14       Impact factor: 5.491

Review 7.  Bacterial Vivisection: How Fluorescence-Based Imaging Techniques Shed a Light on the Inner Workings of Bacteria.

Authors:  Alexander Cambré; Abram Aertsen
Journal:  Microbiol Mol Biol Rev       Date:  2020-10-28       Impact factor: 11.056

8.  Functional dissection of the three N-terminal general secretory pathway domains and the Walker motifs of the traffic ATPase PilF from Thermus thermophilus.

Authors:  Kerstin Kruse; Ralf Salzer; Friederike Joos; Beate Averhoff
Journal:  Extremophiles       Date:  2018-02-20       Impact factor: 2.395

Review 9.  Bacterial secretins: Mechanisms of assembly and membrane targeting.

Authors:  Yuri Rafael de Oliveira Silva; Carlos Contreras-Martel; Pauline Macheboeuf; Andréa Dessen
Journal:  Protein Sci       Date:  2020-02-19       Impact factor: 6.725

10.  Type IV pilus biogenesis, twitching motility, and DNA uptake in Thermus thermophilus: discrete roles of antagonistic ATPases PilF, PilT1, and PilT2.

Authors:  Ralf Salzer; Friederike Joos; Beate Averhoff
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

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