Literature DB >> 24125018

S0-State model of the oxygen-evolving complex of photosystem II.

Rhitankar Pal1, Christian F A Negre, Leslie Vogt, Ravi Pokhrel, Mehmed Z Ertem, Gary W Brudvig, Victor S Batista.   

Abstract

The S0 → S1 transition of the oxygen-evolving complex (OEC) of photosystem II is one of the least understood steps in the Kok cycle of water splitting. We introduce a quantum mechanics/molecular mechanics (QM/MM) model of the S0 state that is consistent with extended X-ray absorption fine structure spectroscopy and X-ray diffraction data. In conjunction with the QM/MM model of the S1 state, we address the proton-coupled electron-transfer (PCET) process that occurs during the S0 → S1 transition, where oxidation of a Mn center and deprotonation of a μ-oxo bridge lead to a significant rearrangement in the OEC. A hydrogen bonding network, linking the D1-D61 residue to a Mn-bound water molecule, is proposed to facilitate the PCET mechanism.

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Year:  2013        PMID: 24125018     DOI: 10.1021/bi401214v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  14 in total

Review 1.  The MOD-QM/MM Method: Applications to Studies of Photosystem II and DNA G-Quadruplexes.

Authors:  M Askerka; J Ho; E R Batista; J A Gascón; V S Batista
Journal:  Methods Enzymol       Date:  2016-07-15       Impact factor: 1.600

2.  Quantum mechanics/molecular mechanics simulation of the ligand vibrations of the water-oxidizing Mn4CaO5 cluster in photosystem II.

Authors:  Shin Nakamura; Takumi Noguchi
Journal:  Proc Natl Acad Sci U S A       Date:  2016-10-11       Impact factor: 11.205

3.  Structural changes in the oxygen-evolving complex of photosystem II induced by the S1 to S2 transition: A combined XRD and QM/MM study.

Authors:  Mikhail Askerka; Jimin Wang; Gary W Brudvig; Victor S Batista
Journal:  Biochemistry       Date:  2014-10-30       Impact factor: 3.162

4.  Interaction of methanol with the oxygen-evolving complex: atomistic models, channel identification, species dependence, and mechanistic implications.

Authors:  Marius Retegan; Dimitrios A Pantazis
Journal:  Chem Sci       Date:  2016-07-05       Impact factor: 9.825

Review 5.  Insights into Photosystem II from Isomorphous Difference Fourier Maps of Femtosecond X-ray Diffraction Data and Quantum Mechanics/Molecular Mechanics Structural Models.

Authors:  Jimin Wang; Mikhail Askerka; Gary W Brudvig; Victor S Batista
Journal:  ACS Energy Lett       Date:  2017-01-12       Impact factor: 23.101

6.  Metal oxidation states in biological water splitting.

Authors:  Vera Krewald; Marius Retegan; Nicholas Cox; Johannes Messinger; Wolfgang Lubitz; Serena DeBeer; Frank Neese; Dimitrios A Pantazis
Journal:  Chem Sci       Date:  2015-01-09       Impact factor: 9.825

7.  Photosystem II oxygen-evolving complex photoassembly displays an inverse H/D solvent isotope effect under chloride-limiting conditions.

Authors:  David J Vinyard; Syed Lal Badshah; M Rita Riggio; Divya Kaur; Annaliesa R Fanguy; M R Gunner
Journal:  Proc Natl Acad Sci U S A       Date:  2019-09-04       Impact factor: 11.205

8.  Energetics of proton release on the first oxidation step in the water-oxidizing enzyme.

Authors:  Keisuke Saito; A William Rutherford; Hiroshi Ishikita
Journal:  Nat Commun       Date:  2015-10-07       Impact factor: 14.919

9.  A five-coordinate Mn(iv) intermediate in biological water oxidation: spectroscopic signature and a pivot mechanism for water binding.

Authors:  Marius Retegan; Vera Krewald; Fikret Mamedov; Frank Neese; Wolfgang Lubitz; Nicholas Cox; Dimitrios A Pantazis
Journal:  Chem Sci       Date:  2015-11-17       Impact factor: 9.825

10.  Crystallographic Data Support the Carousel Mechanism of Water Supply to the Oxygen-Evolving Complex of Photosystem II.

Authors:  Jimin Wang; Mikhail Askerka; Gary W Brudvig; Victor S Batista
Journal:  ACS Energy Lett       Date:  2017-09-07       Impact factor: 23.101

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