Literature DB >> 24120497

Cysteine 295 indirectly affects Ni coordination of carbon monoxide dehydrogenase-II C-cluster.

Takahiro Inoue1, Kyosuke Takao, Takashi Yoshida, Kei Wada, Takashi Daifuku, Yasuko Yoneda, Keiichi Fukuyama, Yoshihiko Sako.   

Abstract

A unique [Ni-Fe-S] cluster (C-cluster) constitutes the active center of Ni-containing carbon monoxide dehydrogenases (CODHs). His(261), which coordinates one of the Fe atoms with Cys(295), is suggested to be the only residue required for Ni coordination in the C-cluster. To evaluate the role of Cys(295), we constructed CODH-II variants. Ala substitution for the Cys(295) substitution resulted in the decrease of Ni content and didn't result in major change of Fe content. In addition, the substitution had no effect on the ability to assemble a full complement of [Fe-S] clusters. This strongly suggests Cys(295) indirectly and His(261) together affect Ni-coordination in the C-cluster.
Copyright © 2013 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  C-cluster; CODH; Carbon monoxide dehydrogenase; Carboxydothermus hydrogenoformans; CoA; IPTG; NH(2)OH; PCR; [Ni–Fe–S] cluster; coenzyme; hydroxylamine; isopropyl β-d-1-thiogalactopyranoside; polymerase chain reaction

Mesh:

Substances:

Year:  2013        PMID: 24120497     DOI: 10.1016/j.bbrc.2013.09.143

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  9 in total

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Authors:  Elizabeth C Wittenborn; Steven E Cohen; Mériem Merrouch; Christophe Léger; Vincent Fourmond; Sébastien Dementin; Catherine L Drennan
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2.  Genomic Analysis of Calderihabitans maritimus KKC1, a Thermophilic, Hydrogenogenic, Carboxydotrophic Bacterium Isolated from Marine Sediment.

Authors:  Kimiho Omae; Yasuko Yoneda; Yuto Fukuyama; Takashi Yoshida; Yoshihiko Sako
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Review 3.  Second and Outer Coordination Sphere Effects in Nitrogenase, Hydrogenase, Formate Dehydrogenase, and CO Dehydrogenase.

Authors:  Sven T Stripp; Benjamin R Duffus; Vincent Fourmond; Christophe Léger; Silke Leimkühler; Shun Hirota; Yilin Hu; Andrew Jasniewski; Hideaki Ogata; Markus W Ribbe
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4.  Draft Genome Sequences of Carboxydothermus pertinax and C. islandicus, Hydrogenogenic Carboxydotrophic Bacteria.

Authors:  Yuto Fukuyama; Kimiho Omae; Yasuko Yoneda; Takashi Yoshida; Yoshihiko Sako
Journal:  Genome Announc       Date:  2017-02-23

5.  Draft Genome Sequences of Two Hydrogenogenic Carboxydotrophic Bacteria, Carboxydocella sp. Strains JDF658 and ULO1, Isolated from Two Distinct Volcanic Fronts in Japan.

Authors:  Yuto Fukuyama; Tatsuki Oguro; Kimiho Omae; Yasuko Yoneda; Takashi Yoshida; Yoshihiko Sako
Journal:  Genome Announc       Date:  2017-04-20

6.  Genomic Insights Into Energy Metabolism of Carboxydocella thermautotrophica Coupling Hydrogenogenic CO Oxidation With the Reduction of Fe(III) Minerals.

Authors:  Stepan V Toshchakov; Alexander V Lebedinsky; Tatyana G Sokolova; Daria G Zavarzina; Alexei A Korzhenkov; Alina V Teplyuk; Natalia I Chistyakova; Vyacheslav S Rusakov; Elizaveta A Bonch-Osmolovskaya; Ilya V Kublanov; Sergey N Gavrilov
Journal:  Front Microbiol       Date:  2018-08-03       Impact factor: 5.640

7.  Transcriptome analysis of a thermophilic and hydrogenogenic carboxydotroph Carboxydothermus pertinax.

Authors:  Yuto Fukuyama; Kimiho Omae; Takashi Yoshida; Yoshihiko Sako
Journal:  Extremophiles       Date:  2019-04-03       Impact factor: 2.395

8.  A Morphing [4Fe-3S-nO]-Cluster within a Carbon Monoxide Dehydrogenase Scaffold.

Authors:  Jae-Hun Jeoung; Jochen Fesseler; Lilith Domnik; Friederike Klemke; Malte Sinnreich; Christian Teutloff; Holger Dobbek
Journal:  Angew Chem Int Ed Engl       Date:  2022-03-04       Impact factor: 16.823

9.  Structural and Phylogenetic Diversity of Anaerobic Carbon-Monoxide Dehydrogenases.

Authors:  Masao Inoue; Issei Nakamoto; Kimiho Omae; Tatsuki Oguro; Hiroyuki Ogata; Takashi Yoshida; Yoshihiko Sako
Journal:  Front Microbiol       Date:  2019-01-17       Impact factor: 5.640

  9 in total

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